Evidence map›Paper›PMID 34431975›Full record

ArticleInvestigative ophthalmology & visual science2021

Tear Proteomics in Keratoconus: A Quantitative SWATH-MS Analysis.

Maite López-López, Uxía Regueiro, Susana B Bravo, María Del Pilar Chantada-Vázquez, Rubén Varela-Fernández, Paulo Ávila-Gómez, Pablo Hervella, Isabel Lema

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Maite López-LópezDepartment of Surgery and Medical-Surgical Specialties. Faculty of Optics and Optometry, Universidade de Santiago de Compostela, Santiago de Compostela, Spain.
Uxía RegueiroDepartment of Surgery and Medical-Surgical Specialties. Faculty of Optics and Optometry, Universidade de Santiago de Compostela, Santiago de Compostela, Spain.
Susana B BravoProteomic Unit, Health Research Institute of Santiago de Compostela (IDIS), Santiago de Compostela, Spain.
María Del Pilar Chantada-VázquezProteomic Unit, Health Research Institute of Santiago de Compostela (IDIS), Santiago de Compostela, Spain.
Rubén Varela-FernándezClinical Neurosciences Research Laboratory, Health Research Institute of Santiago de Compostela (IDIS), Santiago de Compostela, Spain.
Paulo Ávila-GómezClinical Neurosciences Research Laboratory, Health Research Institute of Santiago de Compostela (IDIS), Santiago de Compostela, Spain.
Pablo HervellaClinical Neurosciences Research Laboratory, Health Research Institute of Santiago de Compostela (IDIS), Santiago de Compostela, Spain.
Isabel LemaDepartment of Surgery and Medical-Surgical Specialties. Faculty of Optics and Optometry, Universidade de Santiago de Compostela, Santiago de Compostela, Spain.
Instituto de Investigación Sanitaria de Santiago · ESUniversidade de Santiago de Compostela · ESHospital Provincial de Conxo · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To elucidate dysregulated proteins in keratoconus (KC) to provide a better understanding of the molecular mechanisms that lead to the development of the disease using sequential window acquisition of all theoretical mass spectra (SWATH-MS) as a protein quantification tool of the tear proteomic profile. Methods: Prospective cross-sectional study that includes 25 keratoconic eyes and 25 healthy eyes. All participants underwent a clinical, tomographic, and aberrometric exam. Tear sample was collected using Schirmer strips and analyzed by liquid chromatography with tandem mass spectrometry. SWATH-MS was used as a quantification tool of the tear proteomic profile. The expression of the quantified proteins was compared between groups, and the biological and molecular functions of the dysregulated proteins as well as their functional relationships were studied by in silico analysis. Results: A total of 203 proteins were quantified in tear samples of patients with KC and control participants, of which 18 showed differential expression between groups (P < 0.05). An increase in the expression of 7 proteins and a decrease in the expression of 11 proteins were observed. Protein-protein interactions and gene ontology analysis showed the involvement of these dysregulated proteins in structural, inflammatory-immune, iron homeostasis, oxidative stress, and extracellular matrix proteolysis processes. Conclusions: Tear protein quantification has revealed the dysregulation of proteins involved in biological processes previously associated with KC. Among them, iron homeostasis should be highlighted as a relevant pathway in the KC pathophysiology, and it should be taken into account in the development of therapeutic targets to cope with tissue damage derived from iron accumulation and toxicity.

Indexed as

AdultBiomarkersChromatography, LiquidCross-Sectional StudiesEye ProteinsFemaleHumansKeratoconusMaleProspective StudiesProteomicsTandem Mass SpectrometryTearsBiomarkersEye Proteins

Identifiers

PMID34431975
PMCPMC8399462
OpenAlexW3194213182

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.