Evidence map›Paper›PMID 34431687›Full record

ArticleMicrobiology spectrum2021

Molecular Mirror Technology Facilitates High-Throughput, Accurate SARS-CoV-2 Testing.

Susan Realegeno, Sara Hash, Charlene Wong, Roland Liu, Jovan Shepherd, Robert T Schooley, David A Lipson, Frederick Fung, Suresh Menon, David T Pride

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Susan Realegeno *Department of Pathology, University of California, San Diegogrid.266100.3, La Jolla, California, USA.
Sara Hash *Menon Biosensors, Inc., Escondido, California, USA.
Charlene WongMenon Biosensors, Inc., Escondido, California, USA.
Roland LiuDepartment of Pathology, University of California, San Diegogrid.266100.3, La Jolla, California, USA.
Jovan ShepherdDepartment of Pathology, University of California, San Diegogrid.266100.3, La Jolla, California, USA.
Robert T SchooleyDepartment of Medicine, University of California, San Diegogrid.266100.3, La Jolla, California, USA.
David A LipsonDepartment of Biology, San Diego State University, San Diego, California, USA.ORCID 0000-0003-4530-1539
Frederick FungMenon Biosensors, Inc., Escondido, California, USA.
Suresh Menon *Menon Biosensors, Inc., Escondido, California, USA.
David T Pride *Department of Pathology, University of California, San Diegogrid.266100.3, La Jolla, California, USA.ORCID 0000-0001-8161-6015
University of California San Diego · USSan Diego State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tests to diagnose acute SARS-CoV-2 infection are at the center of controlling the COVID-19 pandemic. Rapid tests benefit from providing quick results but suffer from lower sensitivity, while PCR tests usually take longer to provide more reliable results and can be difficult to scale to meet population needs. We evaluated the diagnostic efficacy of a Molecular Mirror assay (MMA) using nucleic acid extraction and a nucleic acid extraction-free method to determine its ability to identify SARS-CoV-2 in nasal specimens from individuals suspected of having SARS-CoV-2. We compared the MMA using nucleic acid extraction to the emergency use authorization (EUA)-approved TaqPath reverse transcriptase PCR (RT-PCR) assay to determine its performance characteristics. From 412 total specimens (including 115 previous positives and 297 previous negatives), we found that the positive percent agreement (PPA) was 99.1% (confidence interval [CI], 97.4% to 100.0%) and the negative percent agreement (NPA) was 99.3% (95% CI, 98.4% to 100.0%) for SARS-CoV-2 detection. Using the extraction-free method, we analyzed 109 specimens (51 previous positives and 58 previous negatives) and found that the PPA for the more rapid version of the assay was 87.8% (95% CI, 78.5% to 96.9%) and the NPA was 100.0% (95% CI, 100.0%) for virus detection. The extraction method has performance comparable to what is observed in many PCR-based assays. The extraction-free method has lower PPA but has the advantage of being more rapid and having a higher throughput. Our data offer a proof of concept that nuclear magnetic resonance (NMR) detection can be used in SARS-CoV-2 diagnostic testing and may allow for alternative supply chains to increase testing options.

Indexed as

AdolescentAdultAgedAged, 80 and overChildChild, PreschoolCOVID-19COVID-19 Nucleic Acid TestingFemaleHigh-Throughput Screening AssaysHumansInfantMaleMiddle AgedMolecular Diagnostic TechniquesPandemicsautomationCOVID-19Molecular Mirrornuclear magnetic resonancenucleic acid amplificationSARS-CoV-2

Identifiers

PMID34431687
PMCPMC8552600
OpenAlexW3194325877

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.