Evidence map›Paper›PMID 34426436›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2021

Genome-Wide miRNA Expression Profiling of Molecular Subgroups of Peripheral T-cell Lymphoma.

Waseem Lone, Alyssa Bouska, Sunandini Sharma, Catalina Amador, Mallick Saumyaranjan, Tyler A Herek, Tayla B Heavican, Jiayu Yu, Soon Thye Lim, Choon Kiat Ong and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  4. Refining Diagnostic Subtypes of Peripheral T-Cell Lymphoma Using a Multiparameter Approach.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2025
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  19. Valproic Acid Inhibits Peripheral T Cell Lymphoma Cells Behaviors via Restraining PI3K/AKT Pathway.Evidence-based complementary and alternative medicine : eCAM · 2022
    Article
  20. The Transcriptional Differences of Avian CD4Frontiers in cellular and infection microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 12 institutions in 6 countries.

Waseem Lone *Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.
Alyssa Bouska *Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.
Sunandini Sharma *Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.
Catalina AmadorDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.
Mallick SaumyaranjanInstitute of Pathology, All India Institute of Medical Sciences, New Delhi, India.ORCID 0000-0003-4366-5873
Tyler A HerekDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.
Tayla B HeavicanDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Jiayu YuDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.
Soon Thye LimDivision of Medical Oncology, National Cancer Centre Singapore/Duke-National University of Singapore (NUS) Medical School, Singapore.
Choon Kiat OngDivision of Medical Oncology, National Cancer Centre Singapore/Duke-National University of Singapore (NUS) Medical School, Singapore.ORCID 0000-0001-6402-4288
Graham W SlackCenter for Lymphoid Cancer, British Columbia Cancer Agency, Vancouver, British Columbia, Canada.
Kerry J SavageCenter for Lymphoid Cancer, British Columbia Cancer Agency, Vancouver, British Columbia, Canada.
Andreas RosenwaldInstitute of Pathology, University of Würzburg and Comprehensive Cancer Center Mainfranken, Würzburg, Germany.
German OttDepartment of Clinical Pathology, Robert-Bosch-Krankenhaus and Dr. Margarete Fischer-Bosch Institute of Clinical Pharmacology, Stuttgart, Germany.
James R CookDepartment of Laboratory Medicine, Cleveland Clinic, Cleveland, Ohio.
Andrew L FeldmanDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0001-5009-4808
Lisa M RimszaDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Scottsdale, Arizona.
Timothy W McKeithanDepartment of Pathology, City of Hope National Medical Center, Duarte, California.
Timothy C GreinerDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.
Dennis D WeisenburgerDepartment of Pathology, City of Hope National Medical Center, Duarte, California.ORCID 0000-0002-3343-5698
Federica MelleEuropean Institute of Oncology IEO IRCCS, Milan, Italy.ORCID 0000-0002-5541-2673
Giovanna MottaEuropean Institute of Oncology IEO IRCCS, Milan, Italy.
Stefano PileriEuropean Institute of Oncology IEO IRCCS, Milan, Italy.
Julie M VoseDivision of Hematology and Oncology, University of Nebraska Medical Center, Omaha, Nebraska.
Wing C ChanDepartment of Pathology, City of Hope National Medical Center, Duarte, California.
Javeed IqbalDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska. jiqbal@unmc.edu.
University of Nebraska Medical Center · USCity Of Hope National Medical Center · USEuropean Institute of Oncology · ITBC Cancer Agency · CANational Cancer Centre Singapore · SGAll India Institute of Medical Sciences · INCleveland Clinic · USComprehensive Cancer Center Mainfranken · DEDana-Farber Cancer Institute · USDr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology · DEMayo Clinic · USMayo Clinic in Arizona · US

Funding

UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Joann B. Sweasy · 1985 to 2026
$55.0M
Preclinical Models and Therapeutics CoreP01CA229100 · NCI · MAYO CLINIC ARIZONA · PI SCOTT, DAVID WILLIAM · 2018 to 2022
$10.2M
CHEMICAL CARCINOGENESIS &CANCER BIOLOGYT32CA009476 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Jennifer D. Black · 1988 to 2026
$6.2M
Molecular Diagnosis and Prognosis in Aggressive LymphomaU01CA157581 · NCI · UNIVERSITY OF ARIZONA · PI RIMSZA, LISA · 2011 to 2015
$3.1M
Cooperative role of TET2 and IDH2 mutations in angioimmunoblastic T-cell lymphomagenesisR01CA251412 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI IQBAL, JAVEED, SONG, JOO · 2021 to 2025
$2.4M
Pre-analytical variables of bioanalytes affecting the accuracy of PTCL diagnostic and prognostic genetic signaturesU01CA253218 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI IQBAL, JAVEED, MURTAZA, MUHAMMED · 2021 to 2025
$1.8M
UT M.D. Anderson Cancer Center Lymphoma SPOREP50CA136411 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI YOUNES, ANAS · 2009 to 2011
$1.5M
Molecular diagnostic and prognostic signatures for PTCLUH3CA206127 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CHAN, WING C., IQBAL, JAVEED · 2019 to 2021
$864k
Molecular diagnostic and prognostic signatures for PTCLUH2CA206127 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CHAN, WING C., IQBAL, JAVEED · 2017 to 2018
$397k
NCI NIH HHS P01 CA229100NCI NIH HHS P30 CA036727NCI NIH HHS P50 CA136411NCI NIH HHS R01 CA251412NCI NIH HHS T32 CA009476NCI NIH HHS U01 CA157581NCI NIH HHS U01 CA253218NCI NIH HHS UH2 CA206127NCI NIH HHS UH3 CA206127
6 · The paper itself

Abstract

purposePeripheral T-cell lymphoma (PTCL) is a heterogeneous group of non-Hodgkin lymphomas with aggressive clinical behavior. We performed comprehensive miRNA profiling in PTCLs and corresponding normal CD4 EXPERIMENTAL

designWe used nCounter (NanoString Inc) for miRNA profiling and validated using Taqman qRT-PCR (Applied Biosystems, Inc). Normal CD4

resultsEffector Th subsets showed distinct miRNA expression with corresponding transcription factor expression (e.g., BCL6/miR-19b, -106, -30d, -26b, in IL21-polarized; GATA3/miR-155, miR-337 in Th2-polarized; and TBX21/miR-181a, -331-3p in Th1-polarized cells). Integration of miRNA signatures suggested activation of TCR and PI3K signaling in IL21-polarized cells, ERK signaling in Th1-polarized cells, and AKT-mTOR signaling in Th2-polarized cells, validated at protein level. In neoplastic counterparts, distinctive miRNAs were identified and confirmed in an independent cohort. Integrative miRNA-mRNA analysis identified a decrease in target transcript abundance leading to deregulation of sphingolipid and Wnt signaling and epigenetic dysregulation in angioimmunoblastic T-cell lymphoma (AITL), while ERK, MAPK, and cell cycle were identified in PTCL subsets, and decreased target transcript abundance was validated in an independent cohort. Elevated expression of miRNAs (miR-126-3p, miR-145-5p) in AITL was associated with poor clinical outcome.

conclusionsUnique miRNAs and deregulated oncogenic pathways are associated with PTCL subtypes. Upregulated miRNA-126-3p and miR-145-5p expression regulate RhoA-GTPase and inhibit T-cell migration, crucial for AITL pathobiology.

Indexed as

Gene Expression Regulation, NeoplasticGenome-Wide Association StudyHumansLymphoma, T-Cell, PeripheralMicroRNAsTumor Cells, CulturedMicroRNAs

Identifiers

PMID34426436
PMCPMC8563427
OpenAlexW3194849531

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