Evidence map›Paper›PMID 34425644›Full record

ArticleEnvironment international2021

Methylation biomarkers of polybrominated diphenyl ethers (PBDEs) and association with breast cancer risk at the time of menopause.

Yuan Chun Ding, Susan Hurley, June-Soo Park, Linda Steele, Michele Rakoff, Yun Zhu, Jinying Zhao, Mark LaBarge, Leslie Bernstein, Shiuan Chen and 2 more

Open access · goldAbstract read
In one paragraph

Article in Environment international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Yuan Chun DingDepartment of Population Sciences, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Susan HurleyDepartment of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, USA; Office of Environmental Health Hazard Assessment, California Environmental Protection Agency, Oakland, CA, USA.
June-Soo ParkEnvironmental Chemistry Laboratory, Department of Toxic Substances Control, Berkeley, CA, USA.
Linda SteeleDepartment of Population Sciences, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Michele RakoffBreast Cancer Care and Research Fund, Los Angeles, CA, USA.
Yun ZhuDepartment of Epidemiology, College of Public Health and Health Professions and College of Medicine, University of Florida, Gainesville, FL, USA.
Jinying ZhaoDepartment of Epidemiology, College of Public Health and Health Professions and College of Medicine, University of Florida, Gainesville, FL, USA.
Mark LaBargeDepartment of Population Sciences, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Leslie BernsteinDepartment of Population Sciences, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Shiuan ChenDepartment of Cancer Biology, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Peggy ReynoldsDepartment of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, USA.
Susan L NeuhausenDepartment of Population Sciences, Beckman Research Institute of City of Hope, Duarte, CA, USA. Electronic address: sneuhausen@coh.org.
City of Hope · USUniversity of California, San Francisco · USUniversity of Florida · USBreast Cancer Care and Research Fund · USCalifornia Department of Toxic Substances Control · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI XIWEI WU · 1985 to 2026
$86.3M
CALIFORNIA TEACHERS STUDYR01CA077398 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BERNSTEIN, LESLIE · 1998 to 2014
$29.7M
UCSF Environmental Research and Translation for Health Center (EaRTH Center)P30ES030284 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JENNIFER C FUNG, Tracey J. Woodruff · 2020 to 2026
$11.2M
Menopausal transition - a window of susceptibility for the promotion of breast cancer by environmental exposuresU01ES026137 · NIEHS · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHEN, SHIUAN, NEUHAUSEN, SUSAN L. · 2015 to 2019
$4.8M
Epigenetic Determinants of Major Depression: a Monozygotic Discordant TwinStudyR01MH097018 · NIMH · UNIVERSITY OF FLORIDA · PI ZHAO, JINYING · 2013 to 2017
$3.3M
Genome-wide mapping and integrative analysis of DNA 6mA methylome in human AD brainR01AG064786 · NIA · UNIVERSITY OF FLORIDA · PI BENNETT, DAVID ALAN, YAO, BING · 2019 to 2023
$3.3M
Biological Aging Mitrochondrial Variants and Coronary Artery DiseaseK01AG034259 · NIA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ZHAO, JINYING · 2009 to 2012
$525k
NCI NIH HHS P30 CA033572NCI NIH HHS R01 CA077398NIA NIH HHS K01 AG034259NIEHS NIH HHS P30 ES030284NIEHS NIH HHS U01 ES026137NIMH NIH HHS R01 MH097018
6 · The paper itself

Abstract

backgroundExposure to polybrominated diphenyl ethers (PBDEs) may influence risk of developing post-menopausal breast cancer. Although mechanisms are poorly understood, epigenetic regulation of gene expression may play a role.

objectivesTo identify DNA methylation (DNAm) changes associated with PBDE serum levels and test the association of these biomarkers with breast cancer risk.

methodsWe studied 397 healthy women (controls) and 133 women diagnosed with breast cancer (cases) between ages 40 and 58 years who participated in the California Teachers Study. PBDE levels were measured in blood. Infinium Human Methylation EPIC Bead Chips were used to measure DNAm. Using multivariable linear regression models, differentially methylated CpG sites (DMSs) and regions (DMRs) associated with serum PBDE levels were identified using controls. For top-ranked DMSs and DMRs, targeted next-generation bisulfite sequencing was used to measure DNAm for 133 invasive breast cancer cases and 301 age-matched controls. Conditional logistic regression was used to evaluate associations between DMSs and DMRs and breast cancer risk.

resultsWe identified 15 DMSs and 10 DMRs statistically significantly associated with PBDE levels (FDR < 0.05). Methylation changes in a DMS at BMP8B and DMRs at TP53 and A2M-AS1 were statistically significantly (FDR < 0.05) associated with breast cancer risk.

conclusionWe show for the first time that serum PBDE levels are associated with differential methylation and that PBDE-associated DNAm changes in blood are associated with breast cancer risk.

Indexed as

Breast NeoplasmsHalogenated Diphenyl EthersAdultBiomarkersDNA MethylationEpigenesis, GeneticFemaleHumansMenopauseMiddle AgedBiomarkersHalogenated Diphenyl EthersBiomarkersBreast cancerDNA methylationEWASPBDEs

Identifiers

PMID34425644
PMCPMC8385228
OpenAlexW3186325438

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.