Evidence map›Paper›PMID 34424501›Full record

ArticlePlant molecular biology2021

The phosphorylated pathway of serine biosynthesis is crucial for indolic glucosinolate biosynthesis and plant growth promotion conferred by the root endophyte Colletotrichum tofieldiae.

Sandra E Zimmermann, Samira Blau, Henning Frerigmann, Stephan Krueger

Open access · hybridAbstract read
In one paragraph

Article in Plant molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. The Novel DiseaseJournal of fungi (Basel, Switzerland) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sandra E Zimmermann *Institute for Plant Sciences, Biocenter University of Cologne, Zülpicher Straße 47b, 50674, Cologne, Germany.
Samira Blau *Institute for Plant Sciences, Biocenter University of Cologne, Zülpicher Straße 47b, 50674, Cologne, Germany.
Henning FrerigmannMax Planck Institute for Plant Breeding Research, Carl-von-Linne-Weg 10, 50829, Cologne, Germany.
Stephan Krueger *Institute for Plant Sciences, Biocenter University of Cologne, Zülpicher Straße 47b, 50674, Cologne, Germany. stephan.krueger@uni-koeln.de.ORCID http://orcid.org/0000-0002-1658-5993
University of Cologne · DEMax Planck Institute for Plant Breeding Research · DE

Funding

Deutsche Forschungsgemeinschaft EXC-2048/1Deutsche Forschungsgemeinschaft Kr4245/2-1
6 · The paper itself

Abstract

key messagePhosphoglycerate Dehydrogenase 1 of the phosphorylated pathway of serine biosynthesis, active in heterotrophic plastids, is required for the synthesis of serine to enable plant growth at high rates of indolic glucosinolate biosynthesis. Plants have evolved effective strategies to defend against various types of pathogens. The synthesis of a multitude of specialized metabolites represents one effective approach to keep plant attackers in check. The synthesis of those defense compounds is cost intensive and requires extensive interaction with primary metabolism. However, how primary metabolism is adjusted to fulfill the requirements of specialized metabolism is still not completely resolved. Here, we studied the role of the phosphorylated pathway of serine biosynthesis (PPSB) for the synthesis of glucosinolates, the main class of defensive compounds in the model plant Arabidopsis thaliana. We show that major genes of the PPSB are co-expressed with genes required for the synthesis of tryptophan, the unique precursor for the formation of indolic glucosinolates (IG). Transcriptional and metabolic characterization of loss-of-function and dominant mutants of ALTERED TRYPTOPHAN1-like transcription factors revealed demand driven activation of PPSB genes by major regulators of IG biosynthesis. Trans-activation of PPSB promoters by ATR1/MYB34 transcription factor in cultured root cells confirmed this finding. The content of IGs were significantly reduced in plants compromised in the PPSB and these plants showed higher sensitivity against treatment with 5-methyl-tryptophan, a characteristic behavior of mutants impaired in IG biosynthesis. We further found that serine produced by the PPSB is required to enable plant growth under conditions of high demand for IG. In addition, PPSB-deficient plants lack the growth promoting effect resulting from interaction with the beneficial root-colonizing fungus Colletotrichum tofieldiae.

Indexed as

Plant DevelopmentAmino AcidsArabidopsisBiosynthetic PathwaysColletotrichumEndophytesGene Expression Regulation, PlantGenes, PlantGlucosinolatesIndolesPhosphorylationPlant RootsSerineStress, PhysiologicalTranscription FactorsTryptophanAmino AcidsGlucosinolatesIndolesSerineTranscription FactorsTryptophanIndolic glucosinolate BiosynthesisPlant growth promotionSerine biosynthesis

Identifiers

PMID34424501
PMCPMC8443527
OpenAlexW3194982795

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.