Evidence map›Paper›PMID 34421904›Full record

ArticleFrontiers in immunology2021

Replication/Assembly Defective Avian Flavivirus With Internal Deletions in the Capsid Can Be Used as an Approach for Living Attenuated Vaccine.

Yu He, Xiaoli Wang, Jiaqi Guo, Li Mao, Senzhao Zhang, Tao Hu, Mingshu Wang, Renyong Jia, Dekang Zhu, Mafeng Liu and 14 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Yu HeInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Xiaoli WangInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Jiaqi GuoInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Li MaoInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Senzhao ZhangInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Tao HuInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Mingshu WangInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Renyong JiaInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Dekang ZhuResearch Center of Avian Disease, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Mafeng LiuInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Xinxin ZhaoInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Qiao YangInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Ying WuInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Shaqiu ZhangInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Juan HuangInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Sai MaoInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Xumin OuInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Qun GaoInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Di SunInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Yunya LiuInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Ling ZhangInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Yanling YuInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Anchun ChengInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Shun ChenInstitute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avian Tembusu virus (TMUV) is a novel flavivirus causing severe egg drop and fatal encephalitis in avian in Asia. In the present study, we screened the structural and functional requirements of TMUV capsid protein (CP) for viral morphogenesis using reverse genetics methods in combination with replicon packaging assays. TMUV-CP showed dramatic functional and structural flexibility, and even though 44 residues were removed from the N-terminus, it was still capable of packaging replicon RNA; in addition, 33 residues were deleted from the C-terminus (containing nearly the entire α4-helix), and infectious particles were still produced, although α4-α4' is supposedly vital for CP dimerization and nucleocapsid formation. We further analyzed two mutants (ΔC20-43 and ΔC64-96 viruses) with relatively large deletions that still replicated well in BHK-21 cells. Our data indicate that internal deletions within CP impaired viral replication or assembly, resulting in attenuated virus proliferation in cells and attenuated virulence in duck embryos, and these deletion mutations are quite stable in cell culture. An

Indexed as

Sequence DeletionAnimalsCapsid ProteinsCell LineCricetinaeDucksFlavivirusFlavivirus InfectionsImmunogenicity, VaccinePoultry DiseasesVaccinationVaccines, Live, UnattenuatedViral VaccinesVirulenceVirus AssemblyVirus ReplicationCapsid ProteinsVaccines, Live, UnattenuatedViral Vaccinesassembly deficientavian Tembusu viruscapsid protein deletionimmune responselive attenuated vaccineprotective immunityreplication deficient

Identifiers

PMID34421904
PMCPMC8371329

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.