Evidence map›Paper›PMID 34417757›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

Characterizing miRNA-lncRNA Interplay.

Dimitra Karagkouni, Anna Karavangeli, Maria D Paraskevopoulou, Artemis G Hatzigeorgiou

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
20.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 77 citations in OpenAlex.

  1. Pooled it
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  8. Review
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  13. mBiology direct · 2025
    Article
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  20. MicroRNA Gets a Mighty Award.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dimitra KaragkouniDIANA-Lab, Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece. dkaragkouni@uth.gr.
Anna KaravangeliDIANA-Lab, Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece.
Maria D ParaskevopoulouDIANA-Lab, Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece.
Artemis G HatzigeorgiouDIANA-Lab, Department of Computer Science and Biomedical Informatics, University of Thessaly, Lamia, Greece. arhatzig@uth.gr.
University of Thessaly · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) are noncoding transcripts, usually longer than 200 nt, that constitute one of the largest and significantly heterogeneous RNA families. The annotation of lncRNAs and the characterization of their function is a constantly evolving field. LncRNA interplay with microRNAs (miRNAs) is thoroughly studied in several physiological and disease states. miRNAs are small noncoding RNAs (~22 nt) that posttranscriptionally regulate the expression of protein coding genes, through mRNA target cleavage, degradation or direct translational suppression. miRNAs can affect lncRNA half-life by promoting their degradation, or lncRNAs can act as miRNA "sponges," reducing miRNA regulatory effect on target mRNAs. This chapter outlines the miRNA-lncRNA interplay and provides hands-on methodologies for experimentally supported and in silico-guided analyses. The proposed techniques are a valuable asset to further understand lncRNA functions and can be appropriately adapted to become the backbone for further downstream analyses.

Indexed as

Gene Regulatory NetworksHumansMicroRNAsRNA, Long NoncodingRNA, MessengerMicroRNAsRNA, Long NoncodingRNA, MessengerAGO-CLIP-SeqceRNADegradationExperimentally supportedInteractionlncRNAmicroRNASponge

Identifiers

PMID34417757
OpenAlexW3195128757

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.