Evidence map›Paper›PMID 34416429›Full record

ArticleCellular and molecular gastroenterology and hepatology2022

UBCH5 Family Members Differentially Impact Stabilization of Mutant p53 via RNF128 Iso1 During Barrett's Progression to Esophageal Adenocarcinoma.

Paramita Ray, Derek J Nancarrow, Daysha Ferrer-Torres, Zhuwen Wang, May San Martinho, Tonaye Hinton, Joshua H Wu, Angeline Wu, Danielle Kim Turgeon, Max A Hammer and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Ubiquitin-conjugating Enzymes in Cancer.International journal of biological sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Paramita RayDepartment of Radiation Oncology, Ann Arbor, Michigan.
Derek J NancarrowDepartment of Surgery, Ann Arbor, Michigan.
Daysha Ferrer-TorresDepartment of Internal Medicine, Ann Arbor, Michigan.
Zhuwen WangDepartment of Surgery, Ann Arbor, Michigan.
May San MartinhoDepartment of Radiation Oncology, Ann Arbor, Michigan.
Tonaye HintonDepartment of Radiation Oncology, Ann Arbor, Michigan.
Joshua H WuDepartment of Internal Medicine, Ann Arbor, Michigan.
Angeline WuDepartment of Internal Medicine, Ann Arbor, Michigan.
Danielle Kim TurgeonDepartment of Internal Medicine, Ann Arbor, Michigan.
Max A HammerDepartment of Internal Medicine, Ann Arbor, Michigan.
Michael K DameDepartment of Internal Medicine, Ann Arbor, Michigan.
Theodore S LawrenceDepartment of Radiation Oncology, Ann Arbor, Michigan.
Patrick J O'BrienDepartment of Biological Chemistry, Ann Arbor, Michigan.
Jason R SpenceDepartment of Internal Medicine, Ann Arbor, Michigan; Department of Cell and Developmental Biology, Ann Arbor, Michigan; Department of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan.
David G BeerDepartment of Radiation Oncology, Ann Arbor, Michigan; Department of Surgery, Ann Arbor, Michigan.
Dipankar RayDepartment of Radiation Oncology, Ann Arbor, Michigan. Electronic address: dipray@umich.edu.
Michigan Medicine · USUniversity of Michigan · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Alexey I Nesvizhskii · 1988 to 2026
$178.2M
Michigan Institute for Clinical and Health Research (MICHR)UL1TR002240 · NCATS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUMENG, JULIE C, MASHOUR, GEORGE ALEXANDER · 2017 to 2022
$54.9M
University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OMARY, BISHR · 1986 to 2021
$22.5M
Pilot and Feasibility (P and F) ProgramP30DK089503 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Kanakadurga Singer · 2010 to 2026
$20.3M
Validation & Pathology CoreU54CA163059 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RUBENSTEIN, JOEL H, WANG, THOMAS D · 2011 to 2022
$12.1M
TRAINING PROGRAM IN ORGANOGENESIST32HD007505 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PASCA DI MAGLIANO, MARINA, SPENCE, JASON · 1997 to 2021
$6.9M
RNF128 Regulation of TP53 in Barrett's ProgressionR01CA215596 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BEER, DAVID GEORGE, NANCARROW, DEREK JOHN · 2017 to 2021
$2.1M
NCATS NIH HHS UL1 TR002240NCI NIH HHS P30 CA046592NCI NIH HHS R01 CA215596NCI NIH HHS U54 CA163059NICHD NIH HHS T32 HD007505NIDDK NIH HHS P30 DK034933NIDDK NIH HHS P30 DK089503
6 · The paper itself

Abstract

BACKGROUND &

aimsTP53 mutations underlie Barrett's esophagus (BE) progression to dysplasia and cancer. During BE progression, the ubiquitin ligase (E3) RNF128/GRAIL switches expression from isoform 2 (Iso2) to Iso1, stabilizing mutant p53. However, the ubiquitin-conjugating enzyme (E2) that partners with Iso1 to stabilize mutant p53 is unknown.

methodsSingle-cell RNA sequencing of paired normal esophagus and BE tissues identified candidate E2s, further investigated in expression data from BE to esophageal adenocarcinoma (EAC) progression samples. Biochemical and cellular studies helped clarify the role of RNF128-E2 on mutant p53 stability.

resultsThe UBE2D family member 2D3 (UBCH5C) is the most abundant E2 in normal esophagus. However, during BE to EAC progression, loss of UBE2D3 copy number and reduced expression of RNF128 Iso2 were noted, 2 known p53 degraders. In contrast, expression of UBE2D1 (UBCH5A) and RNF128 Iso1 in dysplastic BE and EAC forms an inactive E2-E3 complex, stabilizing mutant p53. To destabilize mutant p53, we targeted RNF128 Iso1 either by mutating asparagine (N48, 59, and 101) residues to block glycosylation to facilitate β-TrCP1-mediated degradation or by mutating proline (P54 and 105) residues to restore p53 polyubiquitinating ability. In addition, either loss of UBCH5A catalytic activity, or disruption of the Iso1-UBCH5A interaction promoted Iso1 loss. Consequently, overexpression of either catalytically dead or Iso1-binding-deficient UBCH5A mutants destabilized Iso1 to degrade mutant p53, thus compromising the clonogenic survival of mutant p53-dependent BE cells.

conclusionsLoss of RNF128 Iso2-UBCH5C and persistence of the Iso1-UBCH5A complex favors mutant p53 stability to promote BE cell survival. Therefore, targeting of Iso1-UBCH5A may provide a novel therapeutic strategy to prevent BE progression.

Indexed as

AdenocarcinomaBarrett EsophagusEsophageal NeoplasmsTumor Suppressor Protein p53Ubiquitin-Conjugating EnzymesUbiquitin-Protein LigasesDisease ProgressionHumansRNF128 protein, humanTP53 protein, humanTumor Suppressor Protein p53UBE2D1 protein, humanUBE2D3 protein, humanUbiquitin-Conjugating EnzymesUbiquitin-Protein LigasesBarrett’s EsophagusEsophageal Adenocarcinomap53 Protein StabilityRNF128-UBCH5 Complex

Identifiers

PMID34416429
PMCPMC8593620
OpenAlexW3195347610

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.