Evidence map›Paper›PMID 34415664›Full record

ArticleClinical and translational science2021

Large variability in plasma efavirenz concentration in Papua New Guinea HIV/AIDS patients associated with high frequency of CYP2B6 516T allele.

Natália Bordin Andriguetti, Helena Katherina Van Schalkwyk, Daniel Thomas Barratt, Joseph Tucci, Paul Pumuye, Andrew Alexander Somogyi

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Natália Bordin AndriguettiDiscipline of Pharmacology, Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID 0000-0002-0077-1468
Helena Katherina Van SchalkwykDiscipline of Pharmacology, Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID 0000-0002-8107-0638
Daniel Thomas BarrattDiscipline of Physiology, Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID 0000-0001-6261-353X
Joseph TucciDepartment of Pharmacy & Biomedical Sciences, La Trobe University Bendigo Campus, Bendigo, Victoria, Australia.ORCID 0000-0002-4495-6931
Paul PumuyeSchool of Medicine and Health Sciences, University of Papua New Guinea, National Capital District, Papua New Guinea.ORCID 0000-0002-5867-7909
Andrew Alexander SomogyiDiscipline of Pharmacology, Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID 0000-0003-4779-0380
The University of Adelaide · AULa Trobe University · AUUniversity of Papua New Guinea · PG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Papua New Guinea (PNG) has a high HIV/AIDS prevalence and very high frequency of the CYP2B6 c.516G>T (rs3745274) variant. We have conducted the first investigation of the impact of c.516G>T and patient demographics on plasma efavirenz (EFV) and 8-hydroxyefavirenz (8OH-EFV) concentrations, metabolic ratio (8OH-EFV/EFV) (MR), and their association with adverse effects, in PNG patients with HIV/AIDS. For 156 PNG patients with HIV/AIDS taking EFV 600 mg/day (for 3-156 months), plasma EFV and 8OH-EFV concentrations were quantified, CYP2B6 c.516G>T genotyped, and demographic and self-reported adverse effects data recorded. Genotype differences in EFV and 8OH-EFV concentrations, MR, and percent within therapeutic range (1000-4000 ng/ml) were examined, in addition to EFV and 8OH-EFV concentration differences between patients experiencing adverse effects. CYP2B6 c.516T allele frequency was 53%. Plasma EFV (p < 0.0001), 8OH-EFV (p < 0.01), and MR (p < 0.0001) differed significantly between genotypes, with genotype explaining 38%, 10%, and 50% of variability, respectively. Plasma EFV concentrations were significantly higher in T/T (median = 5168 ng/ml) than G/G (1036 ng/ml, post hoc p < 0.0001) and G/T (1502 ng/ml, p < 0.0001) genotypes, with all patients above therapeutic range (n = 23) being T/T genotype (p < 0.0001). EFV and 8OH-EFV concentrations were not significantly higher in patients experiencing adverse effects. In PNG HIV/AIDS population where the 516T frequency is very high, it explains a substantial portion of variability (38%) in EFV disposition; however, at least for the patients receiving EFV long term, this does not translate into significant side effects.

Indexed as

Gene FrequencyHIV InfectionsAdolescentAdultAgedAlkynesBenzoxazinesCyclopropanesCytochrome P-450 CYP2B6Cytochrome P-450 CYP2B6 InducersFemaleGenotypeHumansMaleMiddle AgedPapua New GuineaAlkynesBenzoxazinesCyclopropanesCYP2B6 protein, humanCytochrome P-450 CYP2B6Cytochrome P-450 CYP2B6 Inducersefavirenz

Identifiers

PMID34415664
PMCPMC8604234
OpenAlexW3194133976

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.