Evidence map›Paper›PMID 34415309›Full record

ArticleDevelopment (Cambridge, England)2021

Visualizing the organization and differentiation of the male-specific nervous system of C. elegans.

Tessa Tekieli, Eviatar Yemini, Amin Nejatbakhsh, Chen Wang, Erdem Varol, Robert W Fernandez, Neda Masoudi, Liam Paninski, Oliver Hobert

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. A gene expression atlas of a juvenile nervous system.bioRxiv : the preprint server for biology · 2025
    Article
  6. The dopaminergic system ofRoyal Society open science · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. A neurotransmitter atlas ofbioRxiv : the preprint server for biology · 2024
    Article
  15. Article
  16. A cGAL-UAS bipartite expression toolkit forProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Article
  18. Article
  19. Learning Probabilistic Piecewise Rigid Atlases of Model Organisms via Generative Deep Networks.Information processing in medical imaging : proceedings of the ... conference · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Tessa TekieliDepartment of Biological Sciences, Howard Hughes Medical Institute, Columbia University, New York, NY 10027, USA.
Eviatar YeminiDepartment of Biological Sciences, Howard Hughes Medical Institute, Columbia University, New York, NY 10027, USA.ORCID 0000-0003-1977-0761
Amin NejatbakhshDepartments of Statistics and Neuroscience, Grossman Center for the Statistics of Mind, Center for Theoretical Neuroscience, Zuckerman Institute, Columbia University, New York, NY 10027, USA.ORCID 0000-0001-5155-4757
Chen WangDepartment of Biological Sciences, Howard Hughes Medical Institute, Columbia University, New York, NY 10027, USA.
Erdem VarolDepartments of Statistics and Neuroscience, Grossman Center for the Statistics of Mind, Center for Theoretical Neuroscience, Zuckerman Institute, Columbia University, New York, NY 10027, USA.
Robert W FernandezDepartment of Biological Sciences, Howard Hughes Medical Institute, Columbia University, New York, NY 10027, USA.
Neda MasoudiDepartment of Biological Sciences, Howard Hughes Medical Institute, Columbia University, New York, NY 10027, USA.
Liam PaninskiDepartments of Statistics and Neuroscience, Grossman Center for the Statistics of Mind, Center for Theoretical Neuroscience, Zuckerman Institute, Columbia University, New York, NY 10027, USA.
Oliver HobertDepartment of Biological Sciences, Howard Hughes Medical Institute, Columbia University, New York, NY 10027, USA.ORCID 0000-0002-7634-2854

Funding

Hormones: Molecular Mechanism of Action and FunctionsT32DK007328 · NIDDK · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI KOUSTENI, STAVROULA · 1986 to 2025
$7.8M
LIM HOMEOBOX GENE LIM-6 IN MOTOR NEURON DIFFERENTIATIONR01NS039996 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Oliver Hobert · 2001 to 2026
$6.8M
Sexually dimorphic regulation of neuronal identity in C.elegansR37NS039996 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HOBERT, OLIVER · 2015 to 2021
$2.5M
Next-Generation Calcium Imaging Analysis MethodsR01EB022913 · NIBIB · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI PANINSKI, LIAM M · 2016 to 2018
$1.1M
Howard Hughes Medical InstituteNIBIB NIH HHS R01 EB022913NIDDK NIH HHS T32 DK007328NINDS NIH HHS R01 NS039996NINDS NIH HHS R37 NS039996
6 · The paper itself

Abstract

Sex differences in the brain are prevalent throughout the animal kingdom and particularly well appreciated in the nematode Caenorhabditis elegans, where male animals contain a little-studied set of 93 male-specific neurons. To make these neurons amenable for future study, we describe here how a multicolor reporter transgene, NeuroPAL, is capable of visualizing the distinct identities of all male-specific neurons. We used NeuroPAL to visualize and characterize a number of features of the male-specific nervous system. We provide several proofs of concept for using NeuroPAL to identify the sites of expression of gfp-tagged reporter genes and for cellular fate analysis by analyzing the effect of removal of several developmental patterning genes on neuronal identity acquisition. We use NeuroPAL and its intrinsic cohort of more than 40 distinct differentiation markers to show that, even though male-specific neurons are generated throughout all four larval stages, they execute their terminal differentiation program in a coordinated manner in the fourth larval stage. This coordinated wave of differentiation, which we call 'just-in-time' differentiation, couples neuronal maturation programs with the appearance of sexual organs.

Indexed as

AnimalsBrainCaenorhabditis elegansCell DifferentiationGene Expression Regulation, DevelopmentalGenes, ReporterMaleNervous SystemNeurogenesisNeuronsTransgenesC. elegansNervous systemSex specific

Identifiers

PMID34415309
PMCPMC8489020

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.