Evidence map›Paper›PMID 34413962›Full record

ArticleACS medicinal chemistry letters2021

Use of Crystallography and Molecular Modeling for the Inhibition of the Botulinum Neurotoxin A Protease.

Lewis D Turner, Alexander L Nielsen, Lucy Lin, Antonio J Campedelli, Nicholas R Silvaggi, Jason S Chen, Amanda E Wakefield, Karen N Allen, Kim D Janda

Open access · greenAbstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Lewis D TurnerDepartment of Chemistry, Scripps Research, 10550 N. Torrey Pines Road, La Jolla, California 92037, United States.ORCID https://orcid.org/0000-0003-0660-8247
Alexander L NielsenDepartment of Chemistry, Scripps Research, 10550 N. Torrey Pines Road, La Jolla, California 92037, United States.ORCID https://orcid.org/0000-0003-1195-0143
Lucy LinDepartment of Chemistry, Scripps Research, 10550 N. Torrey Pines Road, La Jolla, California 92037, United States.ORCID https://orcid.org/0000-0001-9546-6919
Antonio J CampedelliDepartment of Chemistry, Scripps Research, 10550 N. Torrey Pines Road, La Jolla, California 92037, United States.
Nicholas R SilvaggiDepartment of Chemistry, Boston University, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0003-0576-0714
Jason S ChenAutomated Synthesis Facility, Scripps Research, 10550 N. Torrey Pines Road, La Jolla, California 92037, United States.
Amanda E WakefieldDepartment of Biomedical Engineering and Department of Chemistry, Boston University, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0001-7962-2686
Karen N AllenDepartment of Chemistry, Boston University, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0001-7296-0551
Kim D JandaDepartment of Chemistry, Scripps Research, 10550 N. Torrey Pines Road, La Jolla, California 92037, United States.ORCID https://orcid.org/0000-0001-6759-4227
Scripps Institution of Oceanography · USBoston University · US

Funding

Covalent Inhibition as a Method to Counteract Botulinum IntoxicationR01AI153298 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI JANDA, KIM · 2020 to 2023
$2.6M
NIAID NIH HHS R01 AI153298
6 · The paper itself

Abstract

Botulinum neurotoxins (BoNTs) are extremely toxic and have been deemed a Tier 1 potential bioterrorism agent. The most potent and persistent of the BoNTs is the "A" serotype, with strategies to counter its etiology focused on designing small-molecule inhibitors of its light chain (LC), a zinc-dependent metalloprotease. The successful structure-based drug design of inhibitors has been confounded as the LC is highly flexible with significant morphological changes occurring upon inhibitor binding. To achieve greater success, previous and new cocrystal structures were evaluated from the standpoint of inhibitor enantioselectivity and their effect on active-site morphology. Based upon these structural insights, we designed inhibitors that were predicted to take advantage of π-π stacking interactions present in a cryptic hydrophobic subpocket. Structure-activity relationships were defined, and X-ray crystal structures and docking models were examined to rationalize the observed potency differences between inhibitors.

Identifiers

PMID34413962
PMCPMC8365998
OpenAlexW3166925687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.