Evidence map›Paper›PMID 34413318›Full record

ArticleScientific data2021

Community composition of aquatic fungi across the thawing Arctic.

Mariana Kluge, Christian Wurzbacher, Maxime Wauthy, Karina Engelbrecht Clemmensen, Jeffrey Alistair Hawkes, Karolina Einarsdottir, Jan Stenlid, Sari Peura

Abstract readDataset
In one paragraph

Article in Scientific data, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mariana KlugeDepartment of Forest Mycology and Plant Pathology, Science for Life laboratory, Swedish University of Agricultural Sciences, Uppsala, Sweden. mariana.kluge@slu.se.ORCID http://orcid.org/0000-0001-7500-2041
Christian WurzbacherDepartment of Civil, Geo and Environmental Engineering, Technische Universität München, Munich, Germany.
Maxime WauthyDépartement des Sciences Fondamentales, Université du Québec à Chicoutimi, Saguenay, Québec, Canada.ORCID http://orcid.org/0000-0002-7768-7133
Karina Engelbrecht ClemmensenDepartment of Forest Mycology and Plant Pathology, Science for Life laboratory, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID http://orcid.org/0000-0002-9627-6428
Jeffrey Alistair HawkesDepartment of Chemistry, BMC, Uppsala University, Uppsala, Sweden.
Karolina EinarsdottirLimnology, Department of Ecology and Genetics, EBC, Uppsala University, Uppsala, Sweden.
Jan StenlidDepartment of Forest Mycology and Plant Pathology, Science for Life laboratory, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID http://orcid.org/0000-0002-5344-2094
Sari PeuraDepartment of Forest Mycology and Plant Pathology, Science for Life laboratory, Swedish University of Agricultural Sciences, Uppsala, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thermokarst activity at permafrost sites releases considerable amounts of ancient carbon to the atmosphere. A large part of this carbon is released via thermokarst ponds, and fungi could be an important organismal group enabling its recycling. However, our knowledge about aquatic fungi in thermokarstic systems is extremely limited. In this study, we collected samples from five permafrost sites distributed across circumpolar Arctic and representing different stages of permafrost integrity. Surface water samples were taken from the ponds and, additionally, for most of the ponds also the detritus and sediment samples were taken. All the samples were extracted for total DNA, which was then amplified for the fungal ITS2 region of the ribosomal genes. These amplicons were sequenced using PacBio technology. Water samples were also collected to analyze the chemical conditions in the ponds, including nutrient status and the quality and quantity of dissolved organic carbon. This dataset gives a unique overview of the impact of the thawing permafrost on fungal communities and their potential role on carbon recycling.

Indexed as

MycobiomeArctic RegionsDNA Barcoding, TaxonomicDNA, FungalDNA, Ribosomal SpacerFreezingFungiPermafrostPondsDNA, FungalDNA, Ribosomal Spacer

Identifiers

PMID34413318
PMCPMC8377128

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.