Evidence map›Paper›PMID 34413129›Full record

ArticleMolecular cancer therapeutics2021

SLFN11 is Widely Expressed in Pediatric Sarcoma and Induces Variable Sensitization to Replicative Stress Caused By DNA-Damaging Agents.

Jessica Gartrell, Marcia Mellado-Largarde, Michael R Clay, Armita Bahrami, Natasha A Sahr, April Sykes, Kaley Blankenship, Lauren Hoffmann, Jia Xie, Hyekyung P Cho and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 2 institutions in 1 country.

Jessica GartrellDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Marcia Mellado-LargardeDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee.
Michael R ClayDepartment of Pathology, University of Colorado Anschutz Medical Campus, Aurora, Colorado.ORCID 0000-0003-1659-8927
Armita BahramiDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Natasha A SahrDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0003-4252-6425
April SykesDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0002-7667-8155
Kaley BlankenshipDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Lauren HoffmannDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Jia XieDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee.
Hyekyung P ChoDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee.
Nathaniel TwarogDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee.
Michele ConnellyDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee.
Koon-Kiu YanDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0003-2337-485X
Jiyang YuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0003-3629-4330
Shaina N PorterDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Shondra M Pruett-MillerDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0002-3793-585X
Geoffrey NealeHartwell Center for Bioinformatics and Biotechnology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0003-3776-0858
Christopher L TinkleDepartment of Radiation Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0001-5552-2664
Sara M FedericoDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Elizabeth A StewartDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee. elizabeth.stewart@stjude.org anang.shelat@stjude.org.
Anang A ShelatDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee. elizabeth.stewart@stjude.org anang.shelat@stjude.org.ORCID 0000-0002-6266-2910
St. Jude Children's Research Hospital · USUniversity of Colorado Anschutz Medical Campus · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Intracellular and Intercellular Network Rewiring and Hidden Driver Inference from Single-Cell DataR01GM134382 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI YU, JIYANG · 2019 to 2023
$1.7M
NCI NIH HHS P30 CA021765NIGMS NIH HHS R01 GM134382
6 · The paper itself

Abstract

Pediatric sarcomas represent a heterogeneous group of malignancies that exhibit variable response to DNA-damaging chemotherapy. Schlafen family member 11 protein (SLFN11) increases sensitivity to replicative stress and has been implicated as a potential biomarker to predict sensitivity to DNA-damaging agents (DDA). SLFN11 expression was quantified in 220 children with solid tumors using IHC. Sensitivity to the PARP inhibitor talazoparib (TAL) and the topoisomerase I inhibitor irinotecan (IRN) was assessed in sarcoma cell lines, including SLFN11 knock-out (KO) and overexpression models, and a patient-derived orthotopic xenograft model (PDOX). SLFN11 was expressed in 69% of pediatric sarcoma sampled, including 90% and 100% of Ewing sarcoma and desmoplastic small round-cell tumors, respectively, although the magnitude of expression varied widely. In sarcoma cell lines, protein expression strongly correlated with response to TAL and IRN, with SLFN11 KO resulting in significant loss of sensitivity

Indexed as

AdolescentAdultAnimalsChildChild, PreschoolDNA DamageFemaleGenomicsHumansInfantInfant, NewbornMaleMiceMice, NudeNuclear ProteinsSarcoma, EwingNuclear ProteinsSLFN11 protein, human

Identifiers

PMID34413129
PMCPMC8571037
OpenAlexW3195050159

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.