Evidence map›Paper›PMID 34411089›Full record

ArticlePLoS biology2021

Natural experiments and long-term monitoring are critical to understand and predict marine host-microbe ecology and evolution.

Matthieu Leray, Laetitia G E Wilkins, Amy Apprill, Holly M Bik, Friederike Clever, Sean R Connolly, Marina E De León, J Emmett Duffy, Leïla Ezzat, Sarah Gignoux-Wolfsohn and 16 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 11 institutions in 5 countries.

Matthieu LeraySmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.ORCID 0000-0002-7327-1878
Laetitia G E WilkinsUC Davis Genome Center, University of California, Davis, Davis, California, United States of America.ORCID 0000-0003-3632-2063
Amy ApprillMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts, United States of America.ORCID 0000-0002-4249-2977
Holly M BikDepartment of Marine Sciences and Institute of Bioinformatics, University of Georgia, Athens, Georgia, United States of America.ORCID 0000-0002-4356-3837
Friederike CleverSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.
Sean R ConnollySmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.ORCID 0000-0003-1537-0859
Marina E De LeónSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.
J Emmett DuffyTennenbaum Marine Observatories Network, Smithsonian Environmental Research Center, Edgewater, Maryland, United States of America.ORCID 0000-0001-8595-6391
Leïla EzzatDepartment of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California, United States of America.
Sarah Gignoux-WolfsohnSmithsonian Environmental Research Center, Edgewater, Maryland, United States of America.ORCID 0000-0002-9037-1088
Edward Allen HerreSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.
Jonathan Z KayeGordon and Betty Moore Foundation, Palo Alto, California, United States of America.ORCID 0000-0002-3653-4253
David I KlineSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.ORCID 0000-0001-5128-9439
Jordan G KuenemanSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.ORCID 0000-0001-9521-6282
Melissa K McCormickSmithsonian Environmental Research Center, Edgewater, Maryland, United States of America.ORCID 0000-0001-6564-7575
W Owen McMillanSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.
Aaron O'DeaSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.ORCID 0000-0001-5495-4764
Tiago J PereiraDepartment of Marine Sciences and Institute of Bioinformatics, University of Georgia, Athens, Georgia, United States of America.ORCID 0000-0002-6424-2848
Jillian M PetersenCentre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.ORCID 0000-0002-9852-3445
Daniel F PetticordSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.ORCID 0000-0002-1764-6321
Mark E TorchinSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.
Rebecca Vega ThurberDepartment of Microbiology, Oregon State University, Corvallis, Oregon, United States of America.ORCID 0000-0003-3516-2061
Elin VidevallCenter for Conservation Genomics, Smithsonian Conservation Biology Institute, Washington, DC, United States of America.ORCID 0000-0002-9998-3689
William T WcisloSmithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.ORCID 0000-0001-7897-4778
Benedict YuenCentre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.ORCID 0000-0002-4979-0862
Jonathan A EisenUC Davis Genome Center, University of California, Davis, Davis, California, United States of America.ORCID 0000-0002-0159-2197
Smithsonian Tropical Research Institute · PASmithsonian Environmental Research Center · USUniversity of California, Davis · USUniversity of Georgia · USUniversity of Vienna · ATBrown University · USGordon and Betty Moore Foundation · USManchester Metropolitan University · GBOregon State University · USUniversity of California, Santa Barbara · USWoods Hole Oceanographic Institution · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine multicellular organisms host a diverse collection of bacteria, archaea, microbial eukaryotes, and viruses that form their microbiome. Such host-associated microbes can significantly influence the host's physiological capacities; however, the identity and functional role(s) of key members of the microbiome ("core microbiome") in most marine hosts coexisting in natural settings remain obscure. Also unclear is how dynamic interactions between hosts and the immense standing pool of microbial genetic variation will affect marine ecosystems' capacity to adjust to environmental changes. Here, we argue that significantly advancing our understanding of how host-associated microbes shape marine hosts' plastic and adaptive responses to environmental change requires (i) recognizing that individual host-microbe systems do not exist in an ecological or evolutionary vacuum and (ii) expanding the field toward long-term, multidisciplinary research on entire communities of hosts and microbes. Natural experiments, such as time-calibrated geological events associated with well-characterized environmental gradients, provide unique ecological and evolutionary contexts to address this challenge. We focus here particularly on mutualistic interactions between hosts and microbes, but note that many of the same lessons and approaches would apply to other types of interactions.

Indexed as

AcclimatizationBiological EvolutionEcologyMicrobiotaAnimalsAquatic OrganismsEcosystemHumansSymbiosis

Identifiers

PMID34411089
PMCPMC8376202
OpenAlexW3193888492

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.