Evidence map›Paper›PMID 34410382›Full record

ArticleJournal of experimental botany2021

Characterization of growth and development of sorghum genotypes with differential susceptibility to Striga hermonthica.

Dorota Kawa, Tamera Taylor, Benjamin Thiombiano, Zayan Musa, Hannah E Vahldick, Aimee Walmsley, Alexander Bucksch, Harro Bouwmeester, Siobhan M Brady

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Dorota KawaDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA, USA.ORCID 0000-0002-4227-1621
Tamera TaylorDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA, USA.
Benjamin ThiombianoPlant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Science, University of Amsterdam, Amsterdam, the Netherlands.
Zayan MusaDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA, USA.
Hannah E VahldickDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA, USA.
Aimee WalmsleyPlant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Science, University of Amsterdam, Amsterdam, the Netherlands.
Alexander BuckschDepartment of Plant Biology, University of Georgia, Athens, GA, USA.ORCID 0000-0002-1071-5355
Harro BouwmeesterPlant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Science, University of Amsterdam, Amsterdam, the Netherlands.
Siobhan M BradyDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA, USA.ORCID 0000-0001-9424-8055
University of California, Davis · USUniversity of Amsterdam · NLUniversity of Georgia · US

Funding

Bill & Melinda Gates Foundation OPP1082853Howard Hughes Medical Institute
6 · The paper itself

Abstract

Two sorghum varieties, Shanqui Red (SQR) and SRN39, have distinct levels of susceptibility to the parasitic weed Striga hermonthica, which have been attributed to different strigolactone composition within their root exudates. Root exudates of the Striga-susceptible variety Shanqui Red (SQR) contain primarily 5-deoxystrigol, which has a high efficiency for inducing Striga germination. SRN39 roots primarily exude orobanchol, leading to reduced Striga germination and making this variety resistant to Striga. The structural diversity in exuded strigolactones is determined by a polymorphism in the LOW GERMINATION STIMULANT 1 (LGS1) locus. Yet, the genetic diversity between SQR and SRN39 is broad and has not been addressed in terms of growth and development. Here, we demonstrate additional differences between SQR and SRN39 by phenotypic and molecular characterization. A suite of genes related to metabolism was differentially expressed between SQR and SRN39. Increased levels of gibberellin precursors in SRN39 were accompanied by slower growth rate and developmental delay and we observed an overall increased SRN39 biomass. The slow-down in growth and differences in transcriptome profiles of SRN39 were strongly associated with plant age. Additionally, enhanced lateral root growth was observed in SRN39 and three additional genotypes exuding primarily orobanchol. In summary, we demonstrate that the differences between SQR and SRN39 reach further than the changes in strigolactone profile in the root exudate and translate into alterations in growth and development.

Indexed as

SorghumStrigaGenotypeGerminationLactonesPlant RootsPlant WeedsLactonesDevelopmental delaygibberellinslateral rootmetabolismroot system architecturesorghumStriga hermonthicastrigolactone

Identifiers

PMID34410382
PMCPMC8643648
OpenAlexW3194645385

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.