Evidence map›Paper›PMID 34408160›Full record

ArticleNPJ Parkinson's disease2021

Exploring human-genome gut-microbiome interaction in Parkinson's disease.

Zachary D Wallen, William J Stone, Stewart A Factor, Eric Molho, Cyrus P Zabetian, David G Standaert, Haydeh Payami

Open access · goldAbstract read
In one paragraph

Article in NPJ Parkinson's disease, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Zachary D WallenDepartment of Neurology, University of Alabama at Birmingham, Birmingham, AL, USA.ORCID http://orcid.org/0000-0002-2278-7348
William J StoneDepartment of Neurology, University of Alabama at Birmingham, Birmingham, AL, USA.ORCID http://orcid.org/0000-0001-9847-2441
Stewart A FactorDepartment of Neurology, Emory University School of Medicine, Atlanta, GA, USA.
Eric MolhoDepartment of Neurology, Albany Medical College, Albany, NY, USA.
Cyrus P ZabetianVA Puget Sound Health Care System and Department of Neurology, University of Washington, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-7739-4306
David G StandaertDepartment of Neurology, University of Alabama at Birmingham, Birmingham, AL, USA.ORCID http://orcid.org/0000-0003-2921-8348
Haydeh PayamiDepartment of Neurology, University of Alabama at Birmingham, Birmingham, AL, USA. haydehpayami@uabmc.edu.ORCID http://orcid.org/0000-0001-9084-5338
University of Alabama at Birmingham · USAlbany Medical Center Hospital · USEmory University · USUniversity of Alabama at Birmingham Hospital · USUniversity of Washington · US

Funding

Udall Center Director's meeting poster awardP50NS062684 · NINDS · UNIVERSITY OF WASHINGTON · PI MONTINE, THOMAS J · 2009 to 2020
$18.3M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008361 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YACOUBIAN, TALENE ALENE · 1992 to 2024
$16.8M
Project 3: LRRK2 mediated macrophage responses in PDP50NS108675 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI STANDAERT, DAVID G. · 2018 to 2022
$9.9M
GENETIC ANALYSIS OF ONSET AGE OF PARKINSONS DISEASER01NS036960 · NINDS · WADSWORTH CENTER · PI PAYAMI, HAYDEH · 1998 to 2012
$3.9M
UAB Training Program In NeuroscienceT32NS095775 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Erik D Roberson · 2017 to 2026
$1.6M
NIGMS NIH HHS T32 GM008361NINDS NIH HHS P50 NS062684NINDS NIH HHS P50 NS108675NINDS NIH HHS R01 NS036960NINDS NIH HHS T32 NS095775United States Department of Defense | United States Army | Army Medical Command | Medical Research and Materiel Command (U.S. Army Medical Research and Materiel Command) W81XWH1810508
6 · The paper itself

Abstract

The causes of complex diseases remain an enigma despite decades of epidemiologic research on environmental risks and genome-wide studies that have uncovered tens or hundreds of susceptibility loci for each disease. We hypothesize that the microbiome is the missing link. Genetic studies have shown that overexpression of alpha-synuclein, a key pathological protein in Parkinson's disease (PD), can cause familial PD and variants at alpha-synuclein locus confer risk of idiopathic PD. Recently, dysbiosis of gut microbiome in PD was identified: altered abundances of three microbial clusters were found, one of which was composed of opportunistic pathogens. Using two large datasets, we found evidence that the overabundance of opportunistic pathogens in PD gut is influenced by the host genotype at the alpha-synuclein locus, and that the variants responsible modulate alpha-synuclein expression. Results put forth testable hypotheses on the role of gut microbiome in the pathogenesis of PD, the incomplete penetrance of PD susceptibility genes, and potential triggers of pathology in the gut.

Identifiers

PMID34408160
PMCPMC8373869
OpenAlexW3194972182

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.