Evidence map›Paper›PMID 34406444›Full record

ArticleArchives of microbiology2021

Endophytic bacterial community diversity in two citrus cultivars with different citrus canker disease resistance.

Bing Liu, Jiahao Lai, Simeng Wu, Junxi Jiang, Weigang Kuang

Abstract read
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In one paragraph

Article in Archives of microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Bing LiuCollege of Agronomy, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi, China. lbzjm0418@126.com.ORCID http://orcid.org/0000-0002-8490-4896
Jiahao LaiCollege of Agronomy, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi, China.
Simeng WuCollege of Agronomy, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi, China.
Junxi JiangCollege of Agronomy, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi, China.
Weigang KuangCollege of Agronomy, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi, China. kwing23@126.com.
Jiangxi Agricultural University · CN

Funding

National Natural Science Foundation of China 31460139Natural Science Foundation of Jiangxi Province 20161BAB204184
6 · The paper itself

Abstract

The selective infection of Xanthomonas citri pv. citri (Xcc) to citrus cultivars is universally known, but the relationship between endophytic bacteria and the resistance of host variety to canker disease remains unclear. In this study, endophytic bacterial populations of two citrus cultivars-the resistant satsuma mandarin and the susceptible Newhall navel orange-were analyzed through high-throughput sequencing. The results showed that endophytic bacterial community of satsuma mandarin was more abundant than that of Newhall navel orange. In addition, bacterial abundance was the highest in the spring samples, followed by that in summer and winter samples, in both the varieties. In all samples, the predominant phyla were Proteobacteria, Firmicutes, Actinobacteria, and Bacteroidetes; the major genera were Bacillus and Stenotrophomonas, and the main species was Bacillus subtilis. According to the analysis of the predominant bacteria in the two citrus cultivars, B. subtilis with potential antagonistic characteristics against Xcc existed universally in all samples. However, the susceptible Newhall navel oranges were abundant in Bacillus subtilis and had a relatively large number of canker-causing cooperative bacteria such as Stenotrophomonas. The results suggested that endophytic bacterial community of the two citrus cultivars had some differences based on the season or plant tissue, and these differences were mainly in the quantity of bacteria, affecting citrus canker disease occurrence. In conclusion, the differences in endophytic bacteria on citrus cultivars might be related to host resistance or susceptibility to citrus canker disease.

Indexed as

CitrusDisease ResistanceMicrobiotaXanthomonasEndophytesPlant DiseasesCitrus cankerEndophytic bacterial diversityResistanceSusceptibility

Identifiers

PMID34406444
OpenAlexW3195392660

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.