Evidence map›Paper›PMID 34405923›Full record

ArticleHuman mutation2021

Broad variation in phenotypes for common GAA genotypes in Pompe disease.

Monica Y Niño, Stijn L M In't Groen, Douglas O S de Faria, Marianne Hoogeveen-Westerveld, Hannerieke J M P van den Hout, Ans T van der Ploeg, Atze J Bergsma, W W M Pim Pijnappel

Open access · bronzeAbstract read
In one paragraph

Article in Human mutation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Two novelGenes & diseases · 2027
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Monica Y NiñoDepartment of Pediatrics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Stijn L M In't GroenDepartment of Pediatrics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Douglas O S de FariaDepartment of Pediatrics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Marianne Hoogeveen-WesterveldDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Hannerieke J M P van den HoutDepartment of Pediatrics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Ans T van der PloegDepartment of Pediatrics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Atze J BergsmaDepartment of Pediatrics, Erasmus University Medical Center, Rotterdam, The Netherlands.ORCID 0000-0002-8733-5078
W W M Pim PijnappelDepartment of Pediatrics, Erasmus University Medical Center, Rotterdam, The Netherlands.ORCID 0000-0002-7042-2482
Erasmus MC · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Patients with the common c.-32-13T > G/null GAA genotype have a broad variation in age at symptom onset, ranging from early childhood to late adulthood. Phenotypic variation for other common GAA genotypes remains largely unexplored. Here, we analyzed variation in age at symptom onset for the most common GAA genotypes using the updated and extended Pompe GAA variant database. Patients with the c.2647-7G > A/null genotype invariably presented symptoms at adulthood, while the c.-32-13T > G/null, c.546G > T/null, c.1076-22T > G/null, c.2238G > C/null, and c.2173C > T/null genotypes led to presentations from early childhood up to late adulthood. The c.1309C > T/null genotype was associated with onset at early to late childhood. Symptom onset shifted toward higher ages in homozygous patients. These findings indicate that a broad variation in symptom onset occurs for various common GAA genotypes, suggesting the presence of modifying factors. We identified three new compound heterozygous c.-32-13T > G/null patients who carried the genetic modifier c.510C > T and who showed symptom onset at childhood. While c.510C > T acted by lowering GAA enzyme activity, other putative genetic modifiers did not at the group level, suggesting that these act in trans on processes downstream of GAA enzyme activity.

Indexed as

GenotypePhenotypeAdultalpha-GlucosidasesChildEnzyme Replacement TherapyGlycogen Storage Disease Type IIHumansMutationalpha-GlucosidasesGAA protein, humanGAA deficiencygenotype-phenotypeglycogenosis type IImutation databasePompe disease

Identifiers

PMID34405923
PMCPMC9292902
OpenAlexW3193991850

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.