Evidence map›Paper›PMID 34401920›Full record

ArticleJournal of insect science (Online)2021

Identification of N-linked Glycoproteins in Silkworm Serum Using Con A Lectin Affinity Chromatography and Mass Spectrometry.

Zhaoming Dong, Lin Ye, Yan Zhang, Zhiyong Chen, Benchi Li, Tao Zhang, Ping Zhao

Open access · goldAbstract read
In one paragraph

Article in Journal of insect science (Online), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Zhaoming DongState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China.ORCID 0000-0001-5665-9953
Lin YeState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China.
Yan ZhangState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China.
Zhiyong ChenState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China.
Benchi LiState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China.
Tao ZhangState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China.
Ping ZhaoState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China.
Southwest University · CN

Funding

Chongqing Research Program of Basic Research and Frontier Technology cstc2019jcyj-msxmX0272Natural Science Foundation of Chongqing cstc2020jcyj-cxttX0001
6 · The paper itself

Abstract

Glycosylation is one of the most common post-translational modifications to occur during protein biosynthesis, but remains poorly understood in insects. In this study, we collected serum proteins from two silkworm developmental stages, namely day 7 of the fifth instar larval stage and day 2 of the pupal stage. Results of SDS-PAGE and periodic acid-Schiff staining revealed that most serum proteins with high abundance were putative glycoproteins. LC-MS/MS identified 149 larval and 303 pupal serum proteins in the Con A lectin-enriched fractions. GO analysis revealed that many serum proteins were involved in the proteolysis and carbohydrate metabolic process. 82 N-linked glycoproteins with at least one glycosylation site were identified. N-Linked glycosylation occurred at the sequon, Asn-X-Ser/Thr, and the proportions of Ser and Thr glycosylation at the hydroxy position were found 39.6% and 60.3%, respectively. The N-glycan structures found in serum glycoproteins were mainly Man2FucGlcNAc2 (67.9%). Since storage protein 1 and transferrin had a relatively high abundance in the serum and could be significantly enriched by Con A lectin, their glycosylation was analyzed in detail. Glycoside hydrases, serine proteases and serpins were found to form three interacting glycoprotein networks using the website STRING. This study provides important clues for the understanding of the function of N-linked glycosylation in metabolism, immunity, and metamorphosis.

Indexed as

AnimalsBombyxChromatography, AffinityGlycoproteinsGlycosylationInsect ProteinsMass SpectrometryProteomicsReceptors, Concanavalin ATransferrinconcanavalin A-binding glycoproteinsGlycoproteinsInsect ProteinsReceptors, Concanavalin Astorage proteins, InsectaTransferringlycoproteinglycosylationhemolymphinsectN-glycan

Identifiers

PMID34401920
PMCPMC8367846
OpenAlexW3196009409

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.