Evidence map›Paper›PMID 34401780›Full record

ArticleSTAR protocols2021

Protocol for isolating young adult parvalbumin interneurons from the mouse brain for extraction of high-quality RNA.

Donald J Joseph, Markus Von Deimling, Yuiko Hasegawa, Ana G Cristancho, Rashmi Risbud, Almedia J McCoy, Eric D Marsh

Abstract read
In one paragraph

Article in STAR protocols, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Donald J JosephDivision of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Markus Von DeimlingDivision of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Yuiko HasegawaDivision of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Ana G CristanchoDivision of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Rashmi RisbudDivision of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Almedia J McCoyDivision of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Eric D MarshDivision of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.

Funding

Pediatric Scholars ProgramK12HD043245 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI ST. GEME, JOSEPH W. · 2003 to 2022
$7.4M
The Intellectual and Developmental Disabilities Research Center at CHOP/PennU54HD086984 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI ROBINSON, MICHAEL BYRNE · 2016 to 2020
$6.3M
Seizure generation and network excitability in Arx related Infantile SpasmsR01NS082761 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI MARSH, ERIC D · 2013 to 2017
$1.8M
NICHD NIH HHS K12 HD043245NICHD NIH HHS U54 HD086984NINDS NIH HHS R01 NS082761
6 · The paper itself

Abstract

Dysfunction in the parvalbumin (PV) subclass of GABAergic interneurons is implicated in several neurodevelopmental disorders that evolve in severity with postnatal developmental stages. Understanding the molecular underpinnings of the postnatal changes in the function of PV interneurons has been limited by the difficulty in the isolation of pure adult PV interneurons and high-quality RNA. Here, we describe our protocol for the isolation of pure young adult PV interneurons and preparation of high-quality RNA from these cells. For complete details on the use and execution of this protocol, please refer to Joseph et al. (2021).

Indexed as

AnimalsBrainFlow CytometryGABAergic NeuronsInterneuronsMass SpectrometryMiceParvalbuminsRNAParvalbuminsRNACell isolationFlow cytometry/mass cytometryMolecular biologyNeuroscience

Identifiers

PMID34401780
PMCPMC8350399

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.