Evidence map›Paper›PMID 34400725›Full record

ArticleScientific reports2021

Comparative genome analysis of Bacillus thuringiensis strain HD521 and HS18-1.

Hongwei Sun, Xing Xiang, Qiao Li, Hui Lin, Xiaolin Wang, Jie Sun, Long Luo, Aiping Zheng

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification and Characterization of an Antifungal GeneInternational journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Hongwei Sun *College of Agronomy, Sichuan Agricultural University, Wenjiang, 611130, China.
Xing Xiang *College of Agronomy, Sichuan Agricultural University, Wenjiang, 611130, China.
Qiao LiCollege of Agronomy, Sichuan Agricultural University, Wenjiang, 611130, China.
Hui LinCollege of Agronomy, Sichuan Agricultural University, Wenjiang, 611130, China.
Xiaolin WangCollege of Agronomy, Sichuan Agricultural University, Wenjiang, 611130, China.
Jie SunCollege of Agronomy, Shihezi University, Shihezi, 832003, China.
Long LuoWenshan Academy of Agricultural Sciences, Wenshan, 663000, China. dzhx77@163.com.
Aiping ZhengCollege of Agronomy, Sichuan Agricultural University, Wenjiang, 611130, China. apzh0602@gmail.com.
Sichuan Agricultural University · CNWenshan University · CNShihezi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus thuringiensis (Bt) is an important biological insecticide used to management of different agricultural pests by producing toxic parasporal crystals proteins. Strain HD521 has an antagonistic effect against Rhizoctonia solani AG1IA, the causal agent of rice sheath blight. This strain with three cry7 genes can the formation of bipyramidal parasporal crystals (BPCs). BPCs are used for insecticidal activities against Henosepilachna vigintioctomaculata larva (Coleoptera). Strain HS18-1 contains different types of BPCs encoding genes and has effective toxicity for Lepidoptera and Diptera insects. Here we report the whole genome sequencing and assembly of HD521 and HS18-1 strains and analyzed the genome constitution covering virulence factors, types of plasmid, insertion sequences, and prophage sequences. The results showed that the genome of strain HD521 contains a circular chromosome and six circular plasmids, encoding eight types of virulence protein factors [Immune Inhibitor A, Hemolytic Enterotoxin, S-layer protein, Phospholipase C, Zwittermicin A-resistance protein, Metalloprotease, Chitinase, and N-acyl homoserine lactonase (AiiA)], four families of insertion sequence, and comprises six pro-phage sequences. The genome of strain HS18-1 contains one circular chromosome and nine circular plasmids, encoding five types of virulence protein factors [Hemolytic Enterotoxin, S-layer protein, Phospholipase C, Chitinase, and N-acyl homoserine lactonase (AiiA)] and four families of insertion sequence, and comprises of three pro-phage sequences. The obtained results will contribute to deeply understand the B. thuringiensis strain HD521 and HS18-1 at the genomic level.

Indexed as

Genome, BacterialBacillus PhagesBacillus thuringiensisChromosomes, BacterialDNA, BacterialGenomicsHumansLysogenyMolecular Sequence AnnotationMutagenesis, InsertionalOpen Reading FramesPlasmidsSpecies SpecificityVirulenceDNA, Bacterial

Identifiers

PMID34400725
PMCPMC8368016
OpenAlexW3196089297

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.