Evidence map›Paper›PMID 34400364›Full record

ArticleJournal of genetics and genomics = Yi chuan xue bao2021

Carrageenan oligosaccharides and associated carrageenan-degrading bacteria induce intestinal inflammation in germ-free mice.

Yeshi Yin, Miaomiao Li, Weizhong Gu, Benhua Zeng, Wei Liu, Liying Zhu, Xionge Pi, Donald A Primerano, Hongwei D Yu, Hong Wei and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of genetics and genomics = Yi chuan xue bao, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Yeshi YinState Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Food Research, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
Miaomiao LiShandong Provincial Key Laboratory of Glycoscience and Glycotechnology, Key Laboratory of Marine Drugs of Ministry of Education, Ocean University of China, Qingdao 266100, China.
Weizhong GuDepartment of Gastroenterology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou 310057, China.
Benhua ZengDepartment of Laboratory Animal Science, College of Basic Medical Sciences, Third Military Medical University, Chongqing 400038, China.
Wei LiuState Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Food Research, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
Liying ZhuState Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Food Research, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
Xionge PiState Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Food Research, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
Donald A PrimeranoDepartment of Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25701, United States.
Hongwei D YuDepartment of Biomedical Sciences, Joan C. Edwards School of Medicine, Marshall University, Huntington, WV 25701, United States.
Hong WeiDepartment of Laboratory Animal Science, College of Basic Medical Sciences, Third Military Medical University, Chongqing 400038, China. Electronic address: weihong63528@163.com.
Guangli YuShandong Provincial Key Laboratory of Glycoscience and Glycotechnology, Key Laboratory of Marine Drugs of Ministry of Education, Ocean University of China, Qingdao 266100, China. Electronic address: glyu@ouc.edu.cn.
Xin WangState Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Food Research, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China. Electronic address: xxww101@sina.com.
ZheJiang Academy of Agricultural Sciences · CNArmy Medical University · CNMarshall University · USOcean University of China · CNChildren's Hospital of Zhejiang University · CN

Funding

West Virginia IDEA-CTRU54GM104942 · NIGMS · WEST VIRGINIA UNIVERSITY · PI JUDITH FEINBERG · 2012 to 2026
$81.0M
WV INBRE: The Inhibitor of Growth Family Member 4 (ING4) inhibits L-Type Amino Acid Transporter 1 (LAT1) expression to suppress Breast CancerP20GM103434 · NIGMS · MARSHALL UNIVERSITY · PI Travis Salisbury · 2012 to 2026
$61.1M
Bioengineering a non-pathogenic bacteria to produce medically-relevant biopolymersR44GM113545 · NIGMS · PROGENESIS TECHNOLOGIES, LLC · PI NILES, RICHARD M. · 2017 to 2018
$1.1M
NIGMS NIH HHS P20 GM103434NIGMS NIH HHS R44 GM113545NIGMS NIH HHS U54 GM104942
6 · The paper itself

Abstract

Carrageenans (CGNs) are widely used in foods and pharmaceuticals although their safety remains controversial. To investigate the effects of CGNs and CGN-degrading bacteria in the human colon, we screened for CGN degradation by human fecal microbiota, and for inflammatory response to CGNs and/or CGN-degrading bacteria in germ free mice. Thin-layer chromatography indicated that high molecular weight (MW) CGNs (≥100 kDa) remained undegraded in the presence of human fecal microbiota, whereas low MW CGNs, i.e., κ-carrageenan oligosaccharides (KCO, ~4.5 kDa) were degraded when exposed to seven of eight human fecal samples, although sulfate groups were not removed during degradation. Bacteroides xylanisolvens and Escherichia coli isolates from fecal samples apparently degraded KCO synergistically, with B. xylanisolvens serving as the primary degrader. Combined treatment of KCO with KCO-degrading bacteria led to greater pro-inflammatory effects in the colon and rectum of germ-free mice than either KCO or bacteria alone. Similarly, p-p38-, CD3-, and CD79a-positive immune cells were more abundant in combined treatment group mice than in either single treatment group. Our study shows that KCO-degrading bacteria and the low MW products of KCO can promote proinflammatory effects in mice, and represent two key markers for evaluating CGN safety in foods or medicines.

Indexed as

CarrageenanGerm-Free LifeOligosaccharidesAnimalsBacteriaEscherichia coliFecesGastrointestinal MicrobiomeHumansInflammationMiceCarrageenanOligosaccharidesCarrageenan oligosaccharidesCarrageenansGerm-free mouseIntestinal inflammatoryOligosaccharide degrading bacteria

Identifiers

PMID34400364
PMCPMC8628850
OpenAlexW3193749566

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.