Evidence map›Paper›PMID 34399815›Full record

ArticleGenome biology2021

Retrotransposons as pathogenicity factors of the plant pathogenic fungus Botrytis cinerea.

Antoine Porquier, Constance Tisserant, Francisco Salinas, Carla Glassl, Lucas Wange, Wolfgang Enard, Andreas Hauser, Matthias Hahn, Arne Weiberg

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  4. A multiplant transcriptomic atlas reveals conserved and lineage-specific defense architectures in response toProceedings of the National Academy of Sciences of the United States of America · 2026
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  10. Exploring Genetic Diversity and Inter-/Intraspecific Polymorphism inInternational journal of molecular sciences · 2025
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  12. Fungal Argonaute proteins act in bidirectional cross-kingdom RNA interference during plant infection.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  17. Genome Comparisons betweenJournal of fungi (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Antoine Porquier *Faculty of Biology, Genetics, LMU Munich, Martinsried, Germany.
Constance Tisserant *Faculty of Biology, Genetics, LMU Munich, Martinsried, Germany.
Francisco SalinasFaculty of Biology, Genetics, LMU Munich, Martinsried, Germany.
Carla GlasslFaculty of Biology, Genetics, LMU Munich, Martinsried, Germany.
Lucas WangeFaculty of Biology, Anthropology & Human Genomics, LMU Munich, Martinsried, Germany.
Wolfgang EnardFaculty of Biology, Anthropology & Human Genomics, LMU Munich, Martinsried, Germany.
Andreas HauserGene Center, Laboratory for Functional Genome Analysis, LMU Munich, Martinsried, Germany.
Matthias HahnDepartment of Biology, University of Kaiserslautern, Kaiserslautern, Germany.
Arne WeibergFaculty of Biology, Genetics, LMU Munich, Martinsried, Germany. a.weiberg@lmu.de.ORCID 0000-0003-4300-4864
Ludwig-Maximilians-Universität München · DEMax Planck Institute of Neurobiology · DEInstitut Agro Rennes-Angers · FRLMU Klinikum · DEUniversity of Kaiserslautern · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRetrotransposons are genetic elements inducing mutations in all domains of life. Despite their detrimental effect, retrotransposons can become temporarily active during epigenetic reprogramming and cellular stress response, which may accelerate host genome evolution. In fungal pathogens, a positive role has been attributed to retrotransposons when shaping genome architecture and expression of genes encoding pathogenicity factors; thus, retrotransposons are known to influence pathogenicity.

resultsWe uncover a hitherto unknown role of fungal retrotransposons as being pathogenicity factors, themselves. The aggressive fungal plant pathogen, Botrytis cinerea, is known to deliver some long-terminal repeat (LTR) deriving regulatory trans-species small RNAs (BcsRNAs) into plant cells to suppress host gene expression for infection. We find that naturally occurring, less aggressive B. cinerea strains possess considerably lower copy numbers of LTR retrotransposons and had lost retrotransposon BcsRNA production. Using a transgenic proof-of-concept approach, we reconstitute retrotransposon expression in a BcsRNA-lacking B. cinerea strain, which results in enhanced aggressiveness in a retrotransposon and BcsRNA expression-dependent manner. Moreover, retrotransposon expression in B. cinerea leads to suppression of plant defence-related genes during infection.

conclusionsWe propose that retrotransposons are pathogenicity factors that manipulate host plant gene expression by encoding trans-species BcsRNAs. Taken together, the novelty that retrotransposons are pathogenicity factors will have a broad impact on studies of host-microbe interactions and pathology.

Indexed as

RetroelementsVirulence FactorsBotrytisFungal ProteinsGene ExpressionGenes, PlantHost-Pathogen InteractionsPlant DiseasesPlantsRNA-SeqTerminal Repeat SequencesWhole Genome SequencingFungal ProteinsRetroelementsVirulence FactorsFungal pathogenHost plantRetrotransposonsSmall RNAs

Identifiers

PMID34399815
PMCPMC8365987
OpenAlexW3195529914

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.