Evidence map›Paper›PMID 34396565›Full record

ArticleThe EMBO journal2021

Desensitisation of Notch signalling through dynamic adaptation in the nucleus.

Ranjith Viswanathan, Jonas Hartmann, Cristina Pallares Cartes, Stefano De Renzis

Abstract read
In one paragraph

Article in The EMBO journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Protein design accelerates the development and application of optogenetic tools.Computational and structural biotechnology journal · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Design and engineering of light-sensitive protein switches.Current opinion in structural biology · 2022
    Review
  8. Optogenetic control of NOTCH1 signaling.Cell communication and signaling : CCS · 2022
    Article
  9. Article
  10. Article
  11. [Inhibition of the Notch1/Jagged1 pathway promotes homing of bone mesenchymal stem cells to improve asthma in rats].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2021
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ranjith ViswanathanEuropean Molecular Biology Laboratory, Developmental Biology Unit, Heidelberg, Germany.
Jonas HartmannEuropean Molecular Biology Laboratory, Developmental Biology Unit, Heidelberg, Germany.ORCID 0000-0002-5600-8285
Cristina Pallares CartesEuropean Molecular Biology Laboratory, Developmental Biology Unit, Heidelberg, Germany.
Stefano De RenzisEuropean Molecular Biology Laboratory, Developmental Biology Unit, Heidelberg, Germany.ORCID 0000-0003-4764-2070

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During embryonic development, signalling pathways orchestrate organogenesis by controlling tissue-specific gene expression programmes and differentiation. Although the molecular components of many common developmental signalling systems are known, our current understanding of how signalling inputs are translated into gene expression outputs in real-time is limited. Here we employ optogenetics to control the activation of Notch signalling during Drosophila embryogenesis with minute accuracy and follow target gene expression by quantitative live imaging. Light-induced nuclear translocation of the Notch Intracellular Domain (NICD) causes a rapid activation of target mRNA expression. However, target gene transcription gradually decays over time despite continuous photo-activation and nuclear NICD accumulation, indicating dynamic adaptation to the signalling input. Using mathematical modelling and molecular perturbations, we show that this adaptive transcriptional response fits to known motifs capable of generating near-perfect adaptation and can be best explained by state-dependent inactivation at the target cis-regulatory region. Taken together, our results reveal dynamic nuclear adaptation as a novel mechanism controlling Notch signalling output during tissue differentiation.

Indexed as

Signal TransductionAdaptation, BiologicalAnimalsCell NucleusDrosophilaDrosophila ProteinsEmbryonic DevelopmentGene Expression Regulation, DevelopmentalOrganogenesisReceptors, NotchRegulatory Sequences, Nucleic AcidDrosophila ProteinsReceptors, Notchnear-perfect adaptationNotch signallingoptogeneticssignalling adaptationtranscriptional regulation

Identifiers

PMID34396565
PMCPMC8441390

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.