Evidence map›Paper›PMID 34395515›Full record

ReviewFrontiers in molecular biosciences2021

SARS-CoV-2 Spike Protein Extrapolation for COVID Diagnosis and Vaccine Development.

Yashpal S Malik, Prashant Kumar, Mohd Ikram Ansari, Maged G Hemida, Mohamed E El Zowalaty, Ahmed S Abdel-Moneim, Balasubramanian Ganesh, Sina Salajegheh, Senthilkumar Natesan, Shubhankar Sircar and 7 more

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in molecular biosciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 11 institutions in 8 countries.

Yashpal S MalikDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Prashant KumarAmity Institute of Virology and Immunology, Amity University, Noida, India.
Mohd Ikram AnsariDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Maged G HemidaDepartment of Microbiology, College of Veterinary Medicine, King Faisal University, Hofuf, Saudi Arabia.
Mohamed E El ZowalatyZoonosis Science Center, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Ahmed S Abdel-MoneimMicrobiology Department, College of Medicine, Taif University, Al-Taif, Saudi Arabia.
Balasubramanian GaneshLaboratory Division, Indian Council of Medical Research - National Institute of Epidemiology, Ministry of Health & Family Welfare, Chennai, India.
Sina SalajeghehYoung Researchers and Elites Club, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Senthilkumar NatesanIndian Institute of Public Health Gandhinagar, Gandhinagar, India.
Shubhankar SircarDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Muhammad SafdarDepartment of Breeding and Genetics, Cholistan University of Veterinary & Animal Sciences, Bahawalpur, Pakistan.
O R VinodhkumarDivision of Epidemiology, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Phelipe M DuarteVeterinarian, Professor at the Faculty of Biological and Health Sciences, Universidade de Cuiabá, Primavera do Leste, Brazil.
Shailesh K PatelDivision of Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Jörn KleinFaculty of Health and Social Sciences, University of South-Eastern Norway, Kongsberg, Norway.
Parastoo RahimiFaculty of Veterinary Medicine, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Kuldeep DhamaDivision of Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Indian Veterinary Research Institute · INIslamic Azad University, Science and Research Branch · IRAmity University · INIndian Institute of Public Health Gandhinagar · INKing Faisal University · SAMinistry of Health and Family Welfare · INTaif University · SAUniversidade de Cuiabá · BRUniversity of South-Eastern Norway · NOUniversity of Veterinary and Animal Sciences · PKUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) led to coronavirus disease 2019 (COVID-19) pandemic affecting nearly 71.2 million humans in more than 191 countries, with more than 1.6 million mortalities as of 12 December, 2020. The spike glycoprotein (S-protein), anchored onto the virus envelope, is the trimer of S-protein comprised of S1 and S2 domains which interacts with host cell receptors and facilitates virus-cell membrane fusion. The S1 domain comprises of a receptor binding domain (RBD) possessing an N-terminal domain and two subdomains (SD1 and SD2). Certain regions of S-protein of SARS-CoV-2 such as S2 domain and fragment of the RBD remain conserved despite the high selection pressure. These conserved regions of the S-protein are extrapolated as the potential target for developing molecular diagnostic techniques. Further, the S-protein acts as an antigenic target for different serological assay platforms for the diagnosis of COVID-19. Virus-specific IgM and IgG antibodies can be used to detect viral proteins in ELISA and lateral flow immunoassays. The S-protein of SARS-CoV-2 has very high sequence similarity to SARS-CoV-1, and the monoclonal antibodies (mAbs) against SARS-CoV-1 cross-react with S-protein of SARS-CoV-2 and neutralize its activity. Furthermore,

Indexed as

coronavirus pandemicCOVID-19diagnosisSARS-CoV-2S-proteinvaccines

Identifiers

PMID34395515
PMCPMC8355592
OpenAlexW3184863427

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.