Evidence map›Paper›PMID 34394706›Full record

ArticleComputational and mathematical methods in medicine2021

Bioinformatic Analysis of Prognostic and Immune-Related Genes in Pancreatic Cancer.

Ziang Li, Chang Hu, Zhiqiang Yang, Minlan Yang, Jiayu Fang, Xuhong Zhou

Open access · hybridAbstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ziang LiDepartment of Gastroenterology, Zhongnan Hospital of Wuhan University, 65 Donghu Road, Wuhan, Hubei 430071, China.ORCID https://orcid.org/0000-0003-1262-9810
Chang HuDepartment of Intensive Care Unit, Zhongnan Hospital of Wuhan University, 65 Donghu Road, Wuhan, Hubei 430071, China.ORCID https://orcid.org/0000-0002-5457-6190
Zhiqiang YangDepartment of Spine Surgery and Musculoskeletal Tumor, Zhongnan Hospital of Wuhan University, 65 Donghu Road, Wuhan, Hubei 430071, China.ORCID https://orcid.org/0000-0002-7909-3873
Minlan YangDepartment of Otorhinolaryngology-Head and Neck Surgery, Zhongnan Hospital of Wuhan University, 65 Donghu Road, Wuhan, Hubei 430071, China.ORCID https://orcid.org/0000-0002-9800-184X
Jiayu FangDepartment of Otorhinolaryngology-Head and Neck Surgery, Zhongnan Hospital of Wuhan University, 65 Donghu Road, Wuhan, Hubei 430071, China.ORCID https://orcid.org/0000-0003-1863-8013
Xuhong ZhouDepartment of Otorhinolaryngology-Head and Neck Surgery, Zhongnan Hospital of Wuhan University, 65 Donghu Road, Wuhan, Hubei 430071, China.ORCID https://orcid.org/0000-0002-2441-9696
Wuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pancreatic cancer (PC) is a malignant tumor with poor prognosis. The poor effect of surgery and chemotherapy makes the research of immunotherapy target molecules significant. Therefore, identifying the new molecular targets of PC is important for patients. In our study, we systematically analyzed molecular correlates of pancreatic cancer by bioinformatic analysis. We characterized differentially expressed analysis based on the TCGA pancreatic cancer dataset. Then, univariate Cox regression was employed to screen out overall survival- (OS-) related DEGs. Based on these genes, we established a risk signature by the multivariate Cox regression model. The ICGC cohort and GSE62452 cohort were used to validate the reliability of the risk signature. The impact of T lymphocyte-related genes from risk signature was confirmed in PC. Here, we observed the correlation between the T lymphocyte-related genes and the expression level of targeted therapy. We established a five-mRNA (LY6D, ANLN, ZNF488, MYEOV, and SCN11A) prognostic risk signature. Next, we identified ANLN and MYEOV that were associated with T lymphocyte infiltrations (

Indexed as

AgedBiomarkers, TumorCell Adhesion MoleculesCohort StudiesComputational BiologyDatabases, GeneticFemaleGene Expression Regulation, NeoplasticGPI-Linked ProteinsHumansImmunotherapyKaplan-Meier EstimateLymphocytes, Tumor-InfiltratingMaleMicrofilament ProteinsMiddle AgedANLN protein, humanBiomarkers, TumorCell Adhesion MoleculesGPI-Linked ProteinsLY6D protein, humanMicrofilament ProteinsMYEOV protein, humanNAV1.9 Voltage-Gated Sodium ChannelProto-Oncogene ProteinsRNA, MessengerSCN11A protein, human

Identifiers

PMID34394706
PMCPMC8355962
OpenAlexW3192634211

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.