Evidence map›Paper›PMID 34391779›Full record

ReviewThe Journal of biological chemistry2021

Deubiquitinating enzymes (DUBs): Regulation, homeostasis, and oxidative stress response.

Nathan A Snyder, Gustavo M Silva

Erratum issuedOpen access · goldAbstract readReview
In one paragraph

Review in The Journal of biological chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 190 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
190citing papers in PubMed, 1 pooled it
16.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

190 citing papers in PubMed, 1 synthesis or guideline pooled it, 302 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. USP7 at PML Nuclear Bodies: A Protein Interaction Network Perspective.International journal of molecular sciences · 2026
    Article

130 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Nathan A SnyderDepartment of Biology, Duke University, Durham, North Carolina, USA.
Gustavo M SilvaDepartment of Biology, Duke University, Durham, North Carolina, USA. Electronic address: gustavo.silva@duke.edu.
Duke University · US

Funding

Dissecting the roles of ubiquitin in translation controlR35GM137954 · NIGMS · DUKE UNIVERSITY · PI Gustavo M Silva · 2020 to 2026
$3.0M
NIGMS NIH HHS R35 GM137954
6 · The paper itself

Abstract

Ubiquitin signaling is a conserved, widespread, and dynamic process in which protein substrates are rapidly modified by ubiquitin to impact protein activity, localization, or stability. To regulate this process, deubiquitinating enzymes (DUBs) counter the signal induced by ubiquitin conjugases and ligases by removing ubiquitin from these substrates. Many DUBs selectively regulate physiological pathways employing conserved mechanisms of ubiquitin bond cleavage. DUB activity is highly regulated in dynamic environments through protein-protein interaction, posttranslational modification, and relocalization. The largest family of DUBs, cysteine proteases, are also sensitive to regulation by oxidative stress, as reactive oxygen species (ROS) directly modify the catalytic cysteine required for their enzymatic activity. Current research has implicated DUB activity in human diseases, including various cancers and neurodegenerative disorders. Due to their selectivity and functional roles, DUBs have become important targets for therapeutic development to treat these conditions. This review will discuss the main classes of DUBs and their regulatory mechanisms with a particular focus on DUB redox regulation and its physiological impact during oxidative stress.

Indexed as

AnimalsDeubiquitinating EnzymesEndopeptidasesHomeostasisHumansOxidation-ReductionOxidative StressProtein Processing, Post-TranslationalReactive Oxygen SpeciesSignal TransductionUbiquitinUbiquitinationDeubiquitinating EnzymesEndopeptidasesReactive Oxygen SpeciesUbiquitindeubiquitinationDUBenzymatic regulationoxidative stressredox signalingtranslationubiquitin

Identifiers

PMID34391779
PMCPMC8424594
OpenAlexW3192387066

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.