Evidence map›Paper›PMID 34391449›Full record

ArticleVirology journal2021

First molecular characterization of poxviruses in cattle, sheep, and goats in Botswana.

Boitumelo Magret Modise, Tirumala Bharani Kumar Settypalli, Tebogo Kgotlele, Dingrong Xue, Kebonyemodisa Ntesang, Kago Kumile, Ivancho Naletoski, John Frederick Nyange, Carter Thanda, Kenny Nametso Macheng and 4 more

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  3. First outbreak of lumpy skin disease in Japan, 2024.The Journal of veterinary medical science · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 3 countries.

Boitumelo Magret ModiseBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana. boikensmod@gmail.com.ORCID 0000-0002-6651-3373
Tirumala Bharani Kumar SettypalliAnimal Production and Health Section, Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna International Centre, PO Box 100, 1400, Vienna, Austria.
Tebogo KgotleleBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana.
Dingrong XueAnimal Production and Health Section, Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna International Centre, PO Box 100, 1400, Vienna, Austria.
Kebonyemodisa NtesangBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana.
Kago KumileBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana.
Ivancho NaletoskiAnimal Production and Health Section, Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna International Centre, PO Box 100, 1400, Vienna, Austria.
John Frederick NyangeBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana.
Carter ThandaBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana.
Kenny Nametso MachengBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana.
Chandapiwa Marobela-RaborokgweBotswana National Veterinary Laboratory, Private Bag 0035, Gaborone, Botswana.
Gerrit Johannes ViljoenAnimal Production and Health Section, Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna International Centre, PO Box 100, 1400, Vienna, Austria.
Giovanni CattoliAnimal Production and Health Section, Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna International Centre, PO Box 100, 1400, Vienna, Austria.
Charles Euloge LamienAnimal Production and Health Section, Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna International Centre, PO Box 100, 1400, Vienna, Austria.
International Atomic Energy Agency · ATBotswana Vaccine Institute (Botswana) · BW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPoxviruses within the Capripoxvirus, Orthopoxvirus, and Parapoxvirus genera can infect livestock, with the two former having zoonotic importance. In addition, they induce similar clinical symptoms in common host species, creating a challenge for diagnosis. Although endemic in the country, poxvirus infections of small ruminants and cattle have received little attention in Botswana, with no prior use of molecular tools to diagnose and characterize the pathogens.

methodsA high-resolution melting (HRM) assay was used to detect and differentiate poxviruses in skin biopsy and skin scab samples from four cattle, one sheep, and one goat. Molecular characterization of capripoxviruses and parapoxviruses was undertaken by sequence analysis of RPO30 and GPCR genes.

resultsThe HRM assay revealed lumpy skin disease virus (LSDV) in three cattle samples, pseudocowpox virus (PCPV) in one cattle sample, and orf virus (ORFV) in one goat and one sheep sample. The phylogenetic analyses, based on the RPO30 and GPCR multiple sequence alignments showed that the LSDV sequences of Botswana were similar to common LSDV field isolates encountered in Africa, Asia, and Europe. The Botswana PCPV presented unique features and clustered between camel and cattle PCPV isolates. The Botswana ORFV sequence isolated from goat differed from the ORFV sequence isolated from sheep.

conclusionsThis study is the first report on the genetic characterization of poxvirus diseases circulating in cattle, goats, and sheep in Botswana. It shows the importance of molecular methods to differentially diagnose poxvirus diseases of ruminants.

Indexed as

Orf virusPoxviridaePoxviridae InfectionsPseudocowpox VirusAnimalsBotswanaCattleGoatsLumpy skin disease virusPhylogenyRuminantsSheepSheep DiseasesB2L geneBotswanaGPCRLumpy skin disease virusOrf virusPseudocowpox virusRPO30

Identifiers

PMID34391449
PMCPMC8364013
OpenAlexW3154574099

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.