Evidence map›Paper›PMID 34387474›Full record

ArticleJournal of the American Chemical Society2021

Reprogramming of Protein-Targeted Small-Molecule Medicines to RNA by Ribonuclease Recruitment.

Peiyuan Zhang, Xiaohui Liu, Daniel Abegg, Toru Tanaka, Yuquan Tong, Raphael I Benhamou, Jared Baisden, Gogce Crynen, Samantha M Meyer, Michael D Cameron and 4 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
6.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
  2. Review
  3. JACS Au · 2026
    Article
  4. A Bifunctional Small Molecule Degrader of the Long Noncoding RNA MALAT1 Triplex.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Targeted RNA Degradation as a Promising Therapeutic Strategy.International journal of molecular sciences · 2025
    Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Peiyuan ZhangDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Xiaohui LiuDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Daniel AbeggDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Toru TanakaDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Yuquan TongDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Raphael I BenhamouDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Jared BaisdenDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.ORCID 0000-0003-4661-7252
Gogce CrynenDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Samantha M MeyerDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Michael D CameronDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Arnab K ChatterjeeCalifornia Institute for Biomedical Research (CALIBR), Scripps Research, La Jolla, California 92037, United States.
Alexander AdibekianDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.ORCID 0000-0001-6453-0244
Jessica L Childs-DisneyDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.
Matthew D DisneyDepartment of Chemistry, Scripps Research, Jupiter, Florida 33458, United States.ORCID 0000-0001-8486-1796
Scripps Research Institute · USScripps Institution of Oceanography · US

Funding

Design of Precision Small Molecules Targeting RNA Repeating Transcripts to Manipulate and Study Disease BiologyR35NS116846 · NINDS · UNIVERSITY OF FLORIDA · PI Matthew D Disney · 2020 to 2026
$9.4M
Targeted degradation of RNAs by using small moleculesR01CA249180 · NCI · UNIVERSITY OF FLORIDA · PI Matthew D Disney · 2020 to 2026
$4.8M
NCI NIH HHS R01 CA249180NINDS NIH HHS R35 NS116846
6 · The paper itself

Abstract

Reprogramming known medicines for a novel target with activity and selectivity over the canonical target is challenging. By studying the binding interactions between RNA folds and known small-molecule medicines and mining the resultant dataset across human RNAs, we identified that Dovitinib, a receptor tyrosine kinase (RTK) inhibitor, binds the precursor to microRNA-21 (pre-miR-21). Dovitinib was rationally reprogrammed for pre-miR-21 by using it as an RNA recognition element in a chimeric compound that also recruits RNase L to induce the RNA's catalytic degradation. By enhancing the inherent RNA-targeting activity and decreasing potency against canonical RTK protein targets in cells, the chimera shifted selectivity for pre-miR-21 by 2500-fold, alleviating disease progression in mouse models of triple-negative breast cancer and Alport Syndrome, both caused by miR-21 overexpression. Thus, targeted degradation can dramatically improve selectivity even across different biomolecules, i.e., protein versus RNA.

Indexed as

BenzimidazolesHumansMicroRNAsMolecular StructureNephritis, HereditaryProtein Kinase InhibitorsQuinolonesReceptor Protein-Tyrosine KinasesRibonucleasesSmall Molecule LibrariesTriple Negative Breast Neoplasms4-amino-5-fluoro-3-(5-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl)quinolin-2(1H)-oneBenzimidazolesMicroRNAsMIRN21 microRNA, humanProtein Kinase InhibitorsQuinolonesReceptor Protein-Tyrosine KinasesRibonucleasesSmall Molecule Libraries

Identifiers

PMID34387474
PMCPMC9264281
OpenAlexW3191464459

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.