Evidence map›Paper›PMID 34387007›Full record

ArticleProteins2021

Continuous Automated Model EvaluatiOn (CAMEO)-Perspectives on the future of fully automated evaluation of structure prediction methods.

Xavier Robin, Juergen Haas, Rafal Gumienny, Anna Smolinski, Gerardo Tauriello, Torsten Schwede

Abstract read
In one paragraph

Article in Proteins, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. GeoEvoBuilder: A deep learning framework for efficient functional and thermostable protein design.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. AI-Driven Deep Learning Techniques in Protein Structure Prediction.International journal of molecular sciences · 2024
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xavier RobinBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-6813-3200
Juergen HaasBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-3255-7773
Rafal GumiennyBiozentrum, University of Basel, Basel, Switzerland.
Anna SmolinskiBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0003-1857-2771
Gerardo TaurielloBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-5921-7007
Torsten SchwedeBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0003-2715-335X

Funding

The Protein Structure Inittiative KnowledgebaseU01GM093324 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI BERMAN, HELEN M · 2010 to 2015
$12.9M
NIGMS NIH HHS U01 GM093324
6 · The paper itself

Abstract

The Continuous Automated Model EvaluatiOn (CAMEO) platform complements the biennial CASP experiment by conducting fully automated blind evaluations of three-dimensional protein prediction servers based on the weekly prerelease of sequences of those structures, which are going to be published in the upcoming release of the Protein Data Bank. While in CASP14, significant success was observed in predicting the structures of individual protein chains with high accuracy, significant challenges remain in correctly predicting the structures of complexes. By implementing fully automated evaluation of predictions for protein-protein complexes, as well as for proteins in complex with ligands, peptides, nucleic acids, or proteins containing noncanonical amino acid residues, CAMEO will assist new developments in those challenging areas of active research.

Indexed as

Databases, ProteinProtein ConformationSequence Analysis, ProteinSoftwareCluster AnalysisComputational BiologyModels, MolecularProteinsProteinsbenchmarkingblind assessmentcontinuous evaluationligandsmacromolecular complexesmolecular structure predictionnon-canonical residues

Identifiers

PMID34387007
PMCPMC8673552

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.