Evidence map›Paper›PMID 34385690›Full record

ArticleNature structural & molecular biology2021

Effect of SARS-CoV-2 B.1.1.7 mutations on spike protein structure and function.

Tzu-Jing Yang, Pei-Yu Yu, Yuan-Chih Chang, Kang-Hao Liang, Hsian-Cheng Tso, Meng-Ru Ho, Wan-Yu Chen, Hsiu-Ting Lin, Han-Chung Wu, Shang-Te Danny Hsu

Abstract read
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In one paragraph

Article in Nature structural & molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 168 citations in OpenAlex.

  1. Article
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  4. Profiling of sesquiterpenoid fractions fromBiomolecules & biomedicine · 2025
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  7. Dynamic expedition of leading mutations in SARS-CoV-2 spike glycoproteins.Computational and structural biotechnology journal · 2024
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  9. Review
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  14. Article
  15. Article
  16. Structural proteins of human coronaviruses: what makes them different?Frontiers in cellular and infection microbiology · 2024
    Review
  17. Article
  18. Article
  19. Development of AAV-delivered broadly neutralizing anti-human ACE2 antibodies against SARS-CoV-2 variants.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
    Article
  20. Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Tzu-Jing YangInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID http://orcid.org/0000-0003-1798-7764
Pei-Yu YuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID http://orcid.org/0000-0002-4116-8833
Yuan-Chih ChangInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID http://orcid.org/0000-0002-0289-3768
Kang-Hao LiangInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Hsian-Cheng TsoInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Meng-Ru HoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Wan-Yu ChenInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Hsiu-Ting LinInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Han-Chung WuInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.ORCID http://orcid.org/0000-0002-5185-1169
Shang-Te Danny HsuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan. sthsu@gate.sinica.edu.tw.ORCID http://orcid.org/0000-0002-7231-0185
Institute of Biological Chemistry, Academia Sinica · TWInstitute of Biomedical Sciences, Academia Sinica · TWInstitute of Cellular and Organismic Biology, Academia Sinica · TWNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The B.1.1.7 variant of SARS-CoV-2 first detected in the UK harbors amino-acid substitutions and deletions in the spike protein that potentially enhance host angiotensin conversion enzyme 2 (ACE2) receptor binding and viral immune evasion. Here we report cryo-EM structures of the spike protein of B.1.1.7 in the apo and ACE2-bound forms. The apo form showed one or two receptor-binding domains (RBDs) in the open conformation, without populating the fully closed state. All three RBDs were engaged in ACE2 binding. The B.1.1.7-specific A570D mutation introduces a molecular switch that could modulate the opening and closing of the RBD. The N501Y mutation introduces a π-π interaction that enhances RBD binding to ACE2 and abolishes binding of a potent neutralizing antibody (nAb). Cryo-EM also revealed how a cocktail of two nAbs simultaneously bind to all three RBDs, and demonstrated the potency of the nAb cocktail to neutralize different SARS-CoV-2 pseudovirus strains, including B.1.1.7.

Indexed as

MutationAngiotensin-Converting Enzyme 2Antibodies, NeutralizingAntibodies, ViralBinding SitesCOVID-19Cryoelectron MicroscopyHumansModels, MolecularProtein BindingProtein DomainsReceptors, VirusSARS-CoV-2Spike Glycoprotein, CoronavirusACE2 protein, humanAngiotensin-Converting Enzyme 2Antibodies, NeutralizingAntibodies, ViralReceptors, VirusSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID34385690
OpenAlexW3192680743

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.