Evidence map›Paper›PMID 34385434›Full record

ArticleNature communications2021

GLIS1 regulates trabecular meshwork function and intraocular pressure and is associated with glaucoma in humans.

K Saidas Nair, Chitrangda Srivastava, Robert V Brown, Swanand Koli, Hélène Choquet, Hong Soon Kang, Yien-Ming Kuo, Sara A Grimm, Caleb Sutherland, Alexandra Badea and 12 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  16. Article
  17. Article
  18. Long non-coding RNA SNHG11 regulates the Wnt/β-catenin signaling pathway through rho/ROCK in trabecular meshwork cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2023
    Article
  19. 10 Years of GWAS in intraocular pressure.Frontiers in genetics · 2023
    Review
  20. Physiological and pathological roles of Hic‑5 in several organs (Review).International journal of molecular medicine · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 10 institutions in 2 countries.

K Saidas Nair *Department of Ophthalmology and Department of Anatomy, School of Medicine, University of California, San Francisco, San Francisco, CA, USA.ORCID 0000-0001-5309-9727
Chitrangda Srivastava *Immunity, Inflammation and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
Robert V Brown *Immunity, Inflammation and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
Swanand KoliDepartment of Ophthalmology, School of Medicine, University of California, San Francisco, San Francisco, CA, USA.ORCID 0000-0002-4742-4439
Hélène ChoquetKaiser Permanente Northern California, Division of Research, Oakland, CA, USA.ORCID 0000-0001-9839-8667
Hong Soon KangImmunity, Inflammation and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
Yien-Ming KuoDepartment of Ophthalmology, School of Medicine, University of California, San Francisco, San Francisco, CA, USA.
Sara A GrimmIntegrative Bioinformatics Support Group, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.ORCID 0000-0003-3050-1909
Caleb SutherlandImmunity, Inflammation and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
Alexandra BadeaCenter for In Vivo Microscopy, Department of Radiology, Duke University, Durham, NC, USA.ORCID 0000-0001-6621-4560
G Allan JohnsonCenter for In Vivo Microscopy, Department of Radiology, Duke University, Durham, NC, USA.
Yin ZhaoDepartment of Ophthalmology, School of Medicine, University of California, San Francisco, San Francisco, CA, USA.
Jie YinKaiser Permanente Northern California, Division of Research, Oakland, CA, USA.
Kyoko OkamotoImmunity, Inflammation and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
Graham ClarkThe Jackson Laboratory, Bar Harbor, ME, USA.
Terete BorrásDepartment of Ophthalmology, University of North Carolina School of Medicine, Chapel Hill, NC, USA.
Gulab ZodeDepartment of Pharmacology and Neuroscience, North Texas Eye Research Institute, University of North Texas Health Science Center, Fort Worth, TX, USA.ORCID 0000-0002-7823-2595
Krishnakumar KizhatilThe Jackson Laboratory, Bar Harbor, ME, USA.ORCID 0000-0003-3755-6101
Subhabrata ChakrabartiBrien Holden Eye Research Centre, L. V. Prasad Eye Institute, Hyderabad, India.ORCID 0000-0003-3717-4963
Simon W M JohnThe Jackson Laboratory, Bar Harbor, ME, USA.
Eric JorgensonRegeneron Pharmaceuticals, Inc, Tarrytown, NY, USA.ORCID 0000-0002-5829-8191
Anton M JettenImmunity, Inflammation and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA. jetten@nih.gov.ORCID 0000-0003-0954-4445
National Institutes of Health · USUniversity of California, San Francisco · USDuke University · USJackson Laboratory · USKaiser Permanente · USHoward Hughes Medical Institute · USL V Prasad Eye Institute · INRegeneron (United States) · USUniversity of North Carolina at Chapel Hill · USUniversity of North Texas · US

Funding

Mechanism Of Action And Functions Of The Gli-related Proteins Glis 1-3ZIAES100485 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI JETTEN, ANTON M · 2009 to 2025
$35.9M
Rapid-Prototyping and Design CoreP30EY002162 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LAKKARAJU, APARNA · 1985 to 2024
$16.8M
Factors Determining Intraocular Pressure and Glaucoma SusceptibilityR01EY011721 · NEI · JACKSON LABORATORY · PI JOHN, SIMON W · 2002 to 2018
$12.4M
Crosstalk Between Unfolded Protein Response and Autophagy for the Treatment of GlaucomaR01EY026177 · NEI · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI ZODE, GULAB · 2016 to 2025
$3.8M
Mechanism Of Action And Functions Of The Gli-related Proteins Glis 1-3Z01ES100485 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI JETTEN, ANTON M · 2002 to 2008
$2.3M
Determining How Lymphatic Molecules Control Conventional OutflowR01EY028175 · NEI · JACKSON LABORATORY · PI KIZHATIL, KRISHNAKUMAR · 2017 to 2021
$2.3M
Determining Molecular and Cellular Mechanisms of GlaucomaR01EY022891 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NAIR, KAYARAT SAIDAS · 2013 to 2017
$2.0M
Targeting calcification/ stiffness in glaucoma with Matrix GlaR01EY026220 · NEI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MEI, HUA · 2016 to 2020
$1.9M
Genetic Etiology of Abdominal Hernia SusceptibilityR01DK116738 · NIDDK · KAISER FOUNDATION RESEARCH INSTITUTE · PI AHITUV, NADAV, CHOQUET, HELENE · 2018 to 2020
$1.8M
The Role of Refractive Error in the Etiology of GlaucomaR01EY027004 · NEI · KAISER FOUNDATION RESEARCH INSTITUTE · PI CHOQUET, HELENE · 2017 to 2020
$1.6M
FACTORS DETERMINING INTRAOCULAR PRESSURER29EY011721 · NEI · JACKSON LABORATORY · PI JOHN, SIMON W · 1997 to 2001
$227k
Howard Hughes Medical InstituteIntramural NIH HHS Z01 ES100485NEI NIH HHS P30 EY002162NEI NIH HHS R01 EY011721NEI NIH HHS R01 EY022891NEI NIH HHS R01 EY026177NEI NIH HHS R01 EY026220NEI NIH HHS R01 EY027004NEI NIH HHS R01 EY028175NEI NIH HHS R29 EY011721NIDDK NIH HHS R01 DK116738
6 · The paper itself

Abstract

Chronically elevated intraocular pressure (IOP) is the major risk factor of primary open-angle glaucoma, a leading cause of blindness. Dysfunction of the trabecular meshwork (TM), which controls the outflow of aqueous humor (AqH) from the anterior chamber, is the major cause of elevated IOP. Here, we demonstrate that mice deficient in the Krüppel-like zinc finger transcriptional factor GLI-similar-1 (GLIS1) develop chronically elevated IOP. Magnetic resonance imaging and histopathological analysis reveal that deficiency in GLIS1 expression induces progressive degeneration of the TM, leading to inefficient AqH drainage from the anterior chamber and elevated IOP. Transcriptome and cistrome analyses identified several glaucoma- and extracellular matrix-associated genes as direct transcriptional targets of GLIS1. We also identified a significant association between GLIS1 variant rs941125 and glaucoma in humans (P = 4.73 × 10

Indexed as

Disease Models, AnimalAnimalsAqueous HumorChromatin Immunoprecipitation SequencingDNA-Binding ProteinsGene Expression ProfilingGene Expression RegulationGlaucomaHEK293 CellsHumansIntraocular PressureMiceMice, Inbred C57BLMice, KnockoutRNA-SeqTrabecular MeshworkDNA-Binding ProteinsGlis1 protein, mouseTranscription Factors

Identifiers

PMID34385434
PMCPMC8361148
OpenAlexW3188404599

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.