Evidence map›Paper›PMID 34385308›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

miR-122-based therapies select for three distinct resistance mechanisms based on alterations in RNA structure.

Jasmin Chahal, Luca F R Gebert, Carolina Camargo, Ian J MacRae, Selena M Sagan

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

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  10. Virus-derived circular RNAs populate hepatitis C virus-infected cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Review
  12. Article
  13. Subversion of a protein-microRNA signaling pathway by hepatitis C virus.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jasmin ChahalDepartment of Microbiology & Immunology, McGill University, Montréal, QC H3G 1Y6, Canada.ORCID 0000-0002-5055-2298
Luca F R GebertDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037.ORCID 0000-0002-1830-119X
Carolina CamargoDepartment of Microbiology & Immunology, McGill University, Montréal, QC H3G 1Y6, Canada.
Ian J MacRaeDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037.ORCID 0000-0002-5112-0294
Selena M SaganDepartment of Microbiology & Immunology, McGill University, Montréal, QC H3G 1Y6, Canada; selena.sagan@mcgill.ca.ORCID 0000-0002-8484-3632
McGill University · CAScripps Research Institute · US

Funding

Structural and Mechanistic basis for RNA SilencingR35GM127090 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI IAN JOHN MACRAE · 2018 to 2026
$5.6M
CIHR MOP-136915NIGMS NIH HHS R35 GM127090
6 · The paper itself

Abstract

Hepatitis C virus (HCV) is a positive-sense RNA virus that interacts with a liver-specific microRNA called miR-122. miR-122 binds to two sites in the 5' untranslated region of the viral genome and promotes HCV RNA accumulation. This interaction is important for viral RNA accumulation in cell culture, and miR-122 inhibitors have been shown to be effective at reducing viral titers in chronic HCV-infected patients. Herein, we analyzed resistance-associated variants that were isolated in cell culture or from patients who underwent miR-122 inhibitor-based therapy and discovered three distinct resistance mechanisms all based on changes to the structure of the viral RNA. Specifically, resistance-associated variants promoted riboswitch activity, genome stability, or positive-strand viral RNA synthesis, all in the absence of miR-122. Taken together, these findings provide insight into the mechanism(s) of miR-122-mediated viral RNA accumulation and provide mechanisms of antiviral resistance mediated by changes in RNA structure.

Indexed as

Antiviral AgentsCell Line, TumorDrug Resistance, ViralGene Expression Regulation, ViralGenetic VariationHepacivirusHepatitis C, ChronicHumansMicroRNAsRNA, ViralAntiviral AgentsMicroRNAsMIRN122 microRNA, humanRNA, Viralhepatitis C virusinternal ribosomal entry sitemiR-122resistance-associated variantsriboswitch

Identifiers

PMID34385308
PMCPMC8379925
OpenAlexW3192033934

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.