Evidence map›Paper›PMID 34384035›Full record

ArticleEpigenetics

DNA methylation as a mediator of associations between the environment and chronic diseases: A scoping review on application of mediation analysis.

Ryosuke Fujii, Shuntaro Sato, Yoshiki Tsuboi, Andres Cardenas, Koji Suzuki

Abstract readScoping Review
In one paragraph

Article in Epigenetics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ryosuke FujiiDepartment of Preventive Medical Sciences, Fujita Health University School of Medical Sciences, Toyoake, Japan.ORCID 0000-0003-1730-2059
Shuntaro SatoClinical Research Center, Nagasaki University Hospital, Nagasaki, Japan.ORCID 0000-0002-6055-3649
Yoshiki TsuboiDepartment of Preventive Medical Sciences, Fujita Health University School of Medical Sciences, Toyoake, Japan.ORCID 0000-0001-8145-3949
Andres CardenasDivision of Environmental Health Sciences, School of Public Health and Center for Computational Biology, University of California, Berkeley, California, US.ORCID 0000-0003-2284-3298
Koji SuzukiDepartment of Preventive Medical Sciences, Fujita Health University School of Medical Sciences, Toyoake, Japan.ORCID 0000-0002-3235-9558

Funding

PRENATAL AND POSTNATAL EXPOSURE TO ENVIRONMENTAL MIXTURES: NEURODEVELOPMENT AND DNA METHYLATION BIOMARKERSR01ES031259 · NIEHS · UNIVERSITY OF CALIFORNIA BERKELEY · PI CARDENAS, ANDRES · 2020 to 2024
$1.9M
NIEHS NIH HHS R01 ES031259
6 · The paper itself

Abstract

DNA methylation (DNAm) is one of the most studied epigenetic modifications. DNAm has emerged as a key biological mechanism and biomarkers to test associations between environmental exposure and outcomes in epidemiological studies. Although previous studies have focused on associations between DNAm and either exposure/outcomes, it is useful to test for mediation of the association between exposure and outcome by DNAm. The purpose of this scoping review is to introduce the methodological essence of statistical mediation analysis and to examine emerging epidemiological research applying mediation analyses. We conducted this scoping review for published peer-reviewed journals on this topic using online databases (PubMed, Scopus, Cochrane, and CINAHL) ending in December 2020. We extracted a total of 219 articles by initial screening. After reviewing titles, abstracts, and full texts, a total of 69 articles were eligible for this review. The breakdown of studies assigned to each category was 13 for smoking (18.8%), 8 for dietary intake and famine (11.6%), 6 for other lifestyle factors (8.7%), 8 for clinical endpoints (11.6%), 22 for environmental chemical exposures (31.9%), 2 for socioeconomic status (SES) (2.9%), and 10 for genetic factors and race (14.5%). In this review, we provide an exposure-wide summary for the mediation analysis using DNAm levels. However, we found heterogenous methods and interpretations in mediation analysis with typical issues such as different cell compositions and tissue-specificity. Further accumulation of evidence with diverse exposures, populations and with rigorous methodology will be expected to provide further insight in the role of DNAm in disease susceptibility.

Indexed as

DNA MethylationMediation AnalysisChronic DiseaseEpigenesis, GeneticHumansSmokingDNA methylationenvironmental factorsepidemiologyepigeneticsmediation analysis

Identifiers

PMID34384035
PMCPMC9336467

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.