Evidence map›Paper›PMID 34382319›Full record

ArticleMolecular plant pathology2021

Phytophthora capsici CBM1-containing protein CBP3 is an apoplastic effector with plant immunity-inducing activity.

Zhiyuan Yin, Nan Wang, Weiwei Duan, Lei Pi, Danyu Shen, Daolong Dou

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Characterization of the CBM50 Gene Family inJournal of fungi (Basel, Switzerland) · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Predication of the Effector Proteins Secreted byJournal of fungi (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zhiyuan YinCollege of Plant Protection, China Agricultural University, Beijing, China.
Nan WangCollege of Plant Protection, China Agricultural University, Beijing, China.
Weiwei DuanCollege of Plant Protection, Nanjing Agricultural University, Nanjing, China.
Lei PiCollege of Plant Protection, China Agricultural University, Beijing, China.
Danyu ShenCollege of Plant Protection, Nanjing Agricultural University, Nanjing, China.
Daolong DouCollege of Plant Protection, China Agricultural University, Beijing, China.ORCID 0000-0001-5226-6642
China Agricultural University · CNNanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carbohydrate-binding module family 1 (CBM1) is a cellulose-binding domain that is almost exclusively found in fungi and oomycetes. CBM1-containing proteins (CBPs) have diverse domain architectures and play pivotal roles in the plant-microbe interaction. However, only a few CBPs have been functionally investigated. In this study, we identified PcCBP3 in an oomycete pathogen, Phytophthora capsici. PcCBP3 contains two tandem CBM1 domains and its orthologs from other Phytophthora species exhibit diversity including gene loss, pseudogenization, variations in sequences, and domain structures. PcCBP3 is upregulated during infection and knockout of PcCBP3 results in significantly decreased virulence. Moreover, PcCBP3 requires signal peptide to induce BAK1-dependent cell death in Nicotiana benthamiana. Further studies indicate that PcCBP3-triggered cell death and plant immunity require its N-terminal region, which is conserved in CBM1-containing proteins and other small, secreted, cysteine-rich protein from oomycetes. These results suggest that PcCBP3 is an apoplastic effector and could be perceived by the plant immune system.

Indexed as

PhytophthoraNicotianaPlant DiseasesPlant ImmunityPlantsVirulenceBAK1cellulose binding domainoomycete pathogenpathogen-associated molecular pattern

Identifiers

PMID34382319
PMCPMC8518581
OpenAlexW3190104774

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.