Evidence map›Paper›PMID 34382282›Full record

ArticleProtein science : a publication of the Protein Society2021

Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.

Jiu-Hui Hu, Jing-Wen Chang, Tao Xu, Jia Wang, Xiao Wang, Rongcheng Lin, Deqiang Duanmu, Lin Liu

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Cyanobacteriochromes: A Rainbow of Photoreceptors.Annual review of microbiology · 2024
    Review
  7. Article
  8. Article
  9. Elucidating the origins of phycocyanobilin biosynthesis and phycobiliproteins.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Article
  11. Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.Protein science : a publication of the Protein Society · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jiu-Hui HuSchool of Life Sciences, Anhui University, Hefei, China.
Jing-Wen ChangSchool of Life Sciences, Anhui University, Hefei, China.
Tao XuSchool of Life Sciences, Anhui University, Hefei, China.
Jia WangSchool of Life Sciences, Anhui University, Hefei, China.
Xiao WangSchool of Life Sciences, Anhui University, Hefei, China.
Rongcheng LinKey Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Deqiang DuanmuState Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, China.
Lin LiuSchool of Life Sciences, Anhui University, Hefei, China.ORCID 0000-0002-9803-6540
Anhui University · CNChinese Academy of Sciences · CNHuazhong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The chlorophyll biosynthesis regulator GENOMES UNCOUPLED 4 (GUN4) is conserved in nearly all oxygenic photosynthetic organisms. Recently, GUN4 has been found to be able to bind the linear tetrapyrroles (bilins) and stimulate the magnesium chelatase activity in the unicellular green alga Chlamydomonas reinhardtii. Here, we characterize GUN4 proteins from Arabidopsis thaliana and the cyanobacterium Synechocystis sp. PCC 6803 for their ability to bind bilins, and present the crystal structures of Synechocystis GUN4 in biliverdin-bound, phycocyanobilin-bound, and phytochromobilin-bound forms at the resolutions of 1.05, 1.10, and 1.70 Å, respectively. These linear molecules adopt a cyclic-helical conformation, and bind more tightly than planar porphyrins to the tetrapyrrole-binding pocket of GUN4. Based on structural comparison, we propose a working model of GUN4 in regulation of tetrapyrrole biosynthetic pathway, and address the role of the bilin-bound GUN4 in retrograde signaling.

Indexed as

ArabidopsisArabidopsis ProteinsBacterial ProteinsBile PigmentsIntracellular Signaling Peptides and ProteinsProtein BindingProtein DomainsSynechocystisArabidopsis ProteinsBacterial ProteinsBile PigmentsGUN4 protein, ArabidopsisIntracellular Signaling Peptides and Proteinsbiliverdinphycocyanobilinretrograde signalingtetrapyrrole

Identifiers

PMID34382282
PMCPMC8442963
OpenAlexW3189706987

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.