Evidence map›Paper›PMID 34381049›Full record

ArticleNature communications2021

Downregulation of exhausted cytotoxic T cells in gene expression networks of multisystem inflammatory syndrome in children.

Noam D Beckmann, Phillip H Comella, Esther Cheng, Lauren Lepow, Aviva G Beckmann, Scott R Tyler, Konstantinos Mouskas, Nicole W Simons, Gabriel E Hoffman, Nancy J Francoeur and 81 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 64 citations in OpenAlex.

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  19. Severe COVID-19European respiratory review : an official journal of the European Respiratory Society · 2023
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

91 authors at 7 institutions in 4 countries.

Noam D Beckmann *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA. noam.beckmann@mssm.edu.
Phillip H Comella *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Esther Cheng *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Lauren Lepow *Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Aviva G BeckmannDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Scott R TylerDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-7683-6686
Konstantinos MouskasDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Nicole W SimonsDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Gabriel E HoffmanDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-0957-0224
Nancy J FrancoeurDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Diane Marie Del ValleTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-6983-5362
Gurpawan KangDepartment of Medicine, Division of Surgery, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Anh DoDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Emily MoyaDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Lillian WilkinsDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Jessica Le BerichelTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Christie ChangPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-7651-7220
Robert MarvinPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Sharlene CalorossiPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alona LanskyPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Laura WalkerPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Nancy YiPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alex YuDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Jonathan ChungTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Matthew HartnettIcahn School of Medicine at Mount Sinai, New York, NY, USA.
Melody EatonPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Sandra HatemTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Hajra JamalHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alara AkyatanDepartment of of Rehabilitation and Human Performance, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alexandra TabachnikovaHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Lora E LiharskaDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Liam CotterDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Brian FennessyDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Akhil VaidDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Guillermo BarturenDepartment of Medical Genomics, Center for Genomics and Oncological Research Pfizer/University of Granada/Andalusian Regional Government (GENYO), Granada, Spain.ORCID http://orcid.org/0000-0003-2103-1028
Hardik ShahDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ying-Chih WangDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Shwetha Hara SridharDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Juan SotoDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Swaroop BoseDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kent MadridDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ethan EllisDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Elyze MerzierDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Konstantinos VlachosDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Nataly FishmanDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Manying TinDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Melissa SmithDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Hui XiePrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Manishkumar PatelPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-7949-5610
Kai NiePrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kimberly ArguetaPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Jocelyn HarrisPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Neha KarekarPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Craig BatchelorPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Jose LacunzaPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Mahlet YishakPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kevin TuballesPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ieisha ScottPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Arvind KumarGraduate School of Biomedical Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-2865-1732
Suraj JaladankiDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0003-0406-2973
Charuta AgashePrecision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ryan ThompsonDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-0450-8181
Evan ClarkDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Bojan LosicDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Lauren PetersDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Mount Sinai COVID-19 Biobank Team
Panagiotis RoussosDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-4640-6239
Jun ZhuIcahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0003-0834-8178
Wenhui WangIcahn School of Medicine at Mount Sinai, New York, NY, USA.
Andrew KasarskisIcahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-6454-9076
Benjamin S GlicksbergDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0003-4515-8090
Girish NadkarniMount Sinai COVID Informatics Center, New York, NY, USA.
Dusan BogunovicDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Cordelia ElaihoDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Sandeep GangadharanDepartments of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
George Ofori-AmanfoDepartments of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kasey Alesso-CarraDepartments of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kenan OnelDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Karen M WilsonDepartments of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Carmen ArgmannDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-1110-8012
Supinda BunyavanichDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-6108-439X
Marta E Alarcón-RiquelmeDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-7632-4154
Thomas U MarronTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Adeeb RahmanTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Seunghee Kim-SchulzeTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Sacha GnjaticTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-5643-9520
Bruce D GelbDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-8527-5027
Miriam MeradTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-4481-7827
Robert SebraDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Eric E SchadtDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA. eric.schadt@mssm.edu.ORCID http://orcid.org/0000-0002-7892-8808
Alexander W CharneyDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA. alexander.charney@mssm.edu.ORCID http://orcid.org/0000-0001-8135-6858
Icahn School of Medicine at Mount Sinai · USMount Sinai Medical Center · USNew York Stem Cell Foundation · USChild Health and Development Institute · USGenomics England · GBHasso Plattner Institute · DEPfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research · ES

Funding

Mechanistic CoreU19AI066738 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI WOOD, ROBERT A · 2005 to 2016
$43.6M
High-Dimensional Immune Monitoring of NCI-Supported Immunotherapy TrialsU24CA224319 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Sacha Gnjatic, Seunghee Kim-Schulze · 2017 to 2026
$21.5M
Food Allergy Research Consortium and Statistical CenterU01AI066560 · NIAID · THE EMMES COMPANY, LLC · PI DAWSON, PETER RUSSELL, LINDBLAD, ROBERT · 2005 to 2016
$12.8M
Threshold, Severity, and Immunotherapy of Peanut AllergyU19AI136053 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BUNYAVANICH, SUPINDA, SICHERER, SCOTT H · 2018 to 2023
$9.1M
Gut Microbiome Dynamics in Peanut AllergyR01AI147028 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BUNYAVANICH, SUPINDA · 2019 to 2022
$3.3M
Characterizing and predicting colitis in immune checkpoint blockade-treated cancer patientsU01DK124165 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI COLOMBEL, JEAN-FREDERIC, FAITH, JEREMIAH JAMES · 2020 to 2024
$2.9M
Big Omics Data Engine 2 SupercomputerS10OD026880 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2019 to 2019
$2.0M
Identifying Genetic Drivers of the Immunosuppressive Tumor Microenvironment in Lung CancerK00CA223015 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MOLLAOGLU, GURKAN · 2019 to 2022
$374k
NCI NIH HHS K00 CA223015NCI NIH HHS U24 CA224319NIAID NIH HHS R01 AI147028NIAID NIH HHS U01 AI066560NIAID NIH HHS U19 AI066738NIAID NIH HHS U19 AI136053NIDDK NIH HHS U01 DK124165NIH HHS S10 OD026880
6 · The paper itself

Abstract

Multisystem inflammatory syndrome in children (MIS-C) presents with fever, inflammation and pathology of multiple organs in individuals under 21 years of age in the weeks following severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection. Although an autoimmune pathogenesis has been proposed, the genes, pathways and cell types causal to this new disease remain unknown. Here we perform RNA sequencing of blood from patients with MIS-C and controls to find disease-associated genes clustered in a co-expression module annotated to CD56

Indexed as

AdolescentCD56 AntigenCD57 AntigensCD8-Positive T-LymphocytesChildChild, PreschoolCOVID-19Down-RegulationFemaleHumansInfantInfant, NewbornKiller Cells, NaturalMaleMucocutaneous Lymph Node SyndromeSARS-CoV-2CD56 AntigenCD57 Antigens

Identifiers

PMID34381049
PMCPMC8357784
OpenAlexW3189737094

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.