Evidence map›Paper›PMID 34380744›Full record

ArticleMolecular cancer research : MCR2021

N-Glycosylation Patterns Correlate with Hepatocellular Carcinoma Genetic Subtypes.

Andrew DelaCourt, Alyson Black, Peggi Angel, Richard Drake, Yujin Hoshida, Amit Singal, David Lewin, Bachir Taouli, Sara Lewis, Myron Schwarz and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer research : MCR, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 37 citations in OpenAlex.

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  16. Blood biomarkers of hepatocellular carcinoma: a critical review.Frontiers in cell and developmental biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Andrew DelaCourtDepartment of Cell and Molecular Pharmacology, Medical University of South Carolina, Charleston, South Carolina.
Alyson BlackDepartment of Cell and Molecular Pharmacology, Medical University of South Carolina, Charleston, South Carolina.
Peggi AngelDepartment of Cell and Molecular Pharmacology, Medical University of South Carolina, Charleston, South Carolina.ORCID 0000-0002-4436-555X
Richard DrakeDepartment of Cell and Molecular Pharmacology, Medical University of South Carolina, Charleston, South Carolina.
Yujin HoshidaUniversity of Texas Southwestern Medical Center, Dallas, Texas.
Amit SingalUniversity of Texas Southwestern Medical Center, Dallas, Texas.
David LewinDepartment of Pathology and Laboratory Medicine, Medical University of South Carolina, Charleston, South Carolina.
Bachir TaouliDepartment of Radiology, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-6409-1333
Sara LewisDepartment of Radiology, Icahn School of Medicine at Mount Sinai, New York, New York.
Myron SchwarzDepartment of Surgery, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-9113-886X
M Isabel FielDepartment of Pathology, Icahn School of Medicine at Mount Sinai, New York, New York.
Anand S MehtaDepartment of Cell and Molecular Pharmacology, Medical University of South Carolina, Charleston, South Carolina. mehtaa@musc.edu.
Medical University of South Carolina · USIcahn School of Medicine at Mount Sinai · USThe University of Texas Southwestern Medical Center · US

Funding

Proteomics CoreP30DK123704 · NIDDK · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DON C. ROCKEY · 2020 to 2026
$8.8M
Reverse-engineering precision liver cancer chemopreventionR01CA233794 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HOSHIDA, YUJIN · 2019 to 2023
$3.5M
Glycopathology of HCC: identification of the source cells of serum fucosylationU01CA226052 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DRAKE, RICHARD R., HOSHIDA, YUJIN · 2019 to 2023
$2.8M
Translation of a biomarker panel for the early detection of hepatocellular carcinomaR01CA237659 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI MARRERO, JORGE A, MEHTA, ANAND S. · 2019 to 2023
$2.5M
NCI NIH HHS R01 CA233794NCI NIH HHS R01 CA237659NCI NIH HHS U01 CA226052NIDDK NIH HHS P30 DK123704
6 · The paper itself

Abstract

Hepatocellular carcinoma (HCC) is the second leading cause of cancer deaths globally, and the incidence rate in the United States is increasing. Studies have identified inter- and intratumor heterogeneity as histologic and/or molecular subtypes/variants associated with response to certain molecular targeted therapies. Spatial HCC tissue profiling of N-linked glycosylation by matrix-assisted laser desorption ionization imaging mass spectrometry (MALDI-IMS) may serve as a new method to evaluate the tumor heterogeneity. Previous work has identified significant changes in the N-linked glycosylation of HCC tumors but has not accounted for the heterogeneous genetic and molecular nature of HCC. To determine the correlation between HCC-specific N-glycosylation changes and genetic/molecular tumor features, we profiled HCC tissue samples with MALDI-IMS and correlated the spatial N-glycosylation with a widely used HCC molecular classification (Hoshida subtypes). MALDI-IMS data displayed trends that could approximately distinguish between subtypes, with subtype 1 demonstrating significantly dysregulated N-glycosylation versus adjacent nontumor tissue. Although there were no individual N-glycan structures that could identify specific subtypes, trends emerged regarding the correlation of branched glycan expression to HCC as a whole and fucosylated glycan expression to subtype 1 tumors specifically. IMPLICATIONS: Correlating N-glycosylation to specific subtypes offers the specific detection of subtypes of HCC, which could both enhance early HCC sensitivity and guide targeted clinical therapies.

Indexed as

Carcinoma, HepatocellularGlycosylationHumansLiver Neoplasms

Identifiers

PMID34380744
PMCPMC8802325
OpenAlexW3189916994

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.