Evidence map›Paper›PMID 34380038›Full record

ArticleCell reports2021

Actinin BioID reveals sarcomere crosstalk with oxidative metabolism through interactions with IGF2BP2.

Feria A Ladha, Ketan Thakar, Anthony M Pettinato, Nicholas Legere, Shahnaz Ghahremani, Rachel Cohn, Robert Romano, Emily Meredith, Yu-Sheng Chen, J Travis Hinson

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. BioID2-Based Proximity Labeling in Adult Zebrafish.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  6. Article
  7. Article
  8. A transcriptional enhancer regulates cardiac maturation.Nature cardiovascular research · 2024
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. The Cardiac Sarcomere and Cell Cycle.Current cardiology reports · 2022
    Review
  15. 14-3-3 protein regulation of excitation-contraction coupling.Pflugers Archiv : European journal of physiology · 2022
    Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Feria A LadhaUniversity of Connecticut Health Center, Farmington, CT 06030, USA.
Ketan ThakarThe Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Anthony M PettinatoUniversity of Connecticut Health Center, Farmington, CT 06030, USA.
Nicholas LegereThe Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Shahnaz GhahremaniThe Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Rachel CohnThe Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Robert RomanoUniversity of Connecticut Health Center, Farmington, CT 06030, USA.
Emily MeredithUniversity of Connecticut Health Center, Farmington, CT 06030, USA.
Yu-Sheng ChenThe Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
J Travis HinsonUniversity of Connecticut Health Center, Farmington, CT 06030, USA; The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA; Cardiology Center, UConn Health, Farmington, CT 06030, USA. Electronic address: travis.hinson@jax.org.
Jackson Laboratory · USUConn Health · US

Funding

SCGE Disease Models Studies Supplement: Cardioediting Ttntvs in a humanized mouse modelU01HL156349 · NHLBI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HINSON, JOHN TRAVIS · 2020 to 2022
$2.4M
Comprehensive Analysis of Allelic, Cellular and Molecular Heterogeneity in Human 3-Dimensional Cardiac Microtissues with MYH7 MutationsR01HL142787 · NHLBI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HINSON, JOHN TRAVIS · 2018 to 2021
$2.1M
Metabolic and developmental regulation by AMPK in PRKAG2-associated cardiomyopathyK08HL125807 · NHLBI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HINSON, JOHN TRAVIS · 2015 to 2019
$803k
Human cardiac microtissues with innate immune sensing to study adverse consequences of genome editingU01EB028898 · NIBIB · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HINSON, JOHN TRAVIS · 2019 to 2019
$752k
NHLBI NIH HHS K08 HL125807NHLBI NIH HHS R01 HL142787NHLBI NIH HHS U01 HL156349NIBIB NIH HHS U01 EB028898
6 · The paper itself

Abstract

Actinins are strain-sensing actin cross-linkers that are ubiquitously expressed and harbor mutations in human diseases. We utilize CRISPR, pluripotent stem cells, and BioID to study actinin interactomes in human cardiomyocytes. We identify 324 actinin proximity partners, including those that are dependent on sarcomere assembly. We confirm 19 known interactors and identify a network of RNA-binding proteins, including those with RNA localization functions. In vivo and biochemical interaction studies support that IGF2BP2 localizes electron transport chain transcripts to actinin neighborhoods through interactions between its K homology (KH) domain and actinin's rod domain. We combine alanine scanning mutagenesis and metabolic assays to disrupt and functionally interrogate actinin-IGF2BP2 interactions, which reveal an essential role in metabolic responses to pathological sarcomere activation using a hypertrophic cardiomyopathy model. This study expands our functional knowledge of actinin, uncovers sarcomere interaction partners, and reveals sarcomere crosstalk with IGF2BP2 for metabolic adaptation relevant to human disease.

Indexed as

ActininCardiomyopathy, HypertrophicElectron TransportHEK293 CellsHumansMuscle ContractionOxidation-ReductionProtein BindingProtein Interaction MappingRNA-Binding ProteinsRNA, MessengerSarcomeresActininIGF2BP2 protein, humanRNA-Binding ProteinsRNA, MessengeractininBioIDIGF2BP2mRNA localizationoxidative phosphorylationprotein-protein interactionsquantitative proteomicsRNA-binding proteinssarcomereZ-disc

Identifiers

PMID34380038
PMCPMC8447243
OpenAlexW3192972983

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.