Evidence map›Paper›PMID 34378773›Full record

ArticleDisease models & mechanisms2021

Development and optimization of an in vivo electrocardiogram recording method and analysis program for adult zebrafish.

ThuyVy Duong, Rebecca Rose, Adriana Blazeski, Noah Fine, Courtney E Woods, Joseph F Thole, Nona Sotoodehnia, Elsayed Z Soliman, Leslie Tung, Andrew S McCallion and 1 more

Abstract read
In one paragraph

Article in Disease models & mechanisms, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Adult zebrafish as advanced models of human disease.Disease models & mechanisms · 2023
    Article
  3. Sharing resources to advance translational research.Disease models & mechanisms · 2022
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

ThuyVy DuongMcKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0001-9733-440X
Rebecca RoseMcKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Adriana BlazeskiDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21205, USA.ORCID 0000-0002-1536-5307
Noah FineMcKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Courtney E WoodsMcKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Joseph F TholeMcKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Nona SotoodehniaCardiovascular Health Research Unit, Departments of Medicine and Epidemiology, University of Washington, Seattle, WA 98101, USA.
Elsayed Z SolimanEpidemiological Cardiology Research Center (EPICARE), Wake Forest School of Medicine, Winston Salem, NC 27101, USA.
Leslie TungDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21205, USA.
Andrew S McCallionMcKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-0016-8466
Dan E ArkingMcKusick-Nathans Institute, Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0001-8980-8695

Funding

Murine Mutagenesis CoreP30NS050274 · NINDS · JOHNS HOPKINS UNIVERSITY · PI KOLODKIN, ALEX L · 2005 to 2020
$10.9M
Functional Dissection of the Sudden Cardiac Death Associated BAZ2B locusR01HL111267 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI ARKING, DAN E · 2012 to 2016
$3.6M
Neuropsychiatric Disease-focused Exploration of Neuronal Regulatory LandscapesR01MH106522 · NIMH · JOHNS HOPKINS UNIVERSITY · PI MCCALLION, ANDREW S · 2016 to 2021
$3.0M
Genomics of Cardiac Electrical Activity and ArrhythmiaR01HL116747 · NHLBI · UNIVERSITY OF WASHINGTON · PI ARKING, DAN E, SOTOODEHNIA, NONA · 2013 to 2016
$2.8M
Systems Biology Analysis of Cardiac Electrical Activity and Arrhythmias.R01HL141989 · NHLBI · UNIVERSITY OF WASHINGTON · PI ARKING, DAN E, SHOJAIE, ALI · 2019 to 2020
$968k
NHLBI NIH HHS R01 HL111267NHLBI NIH HHS R01 HL116747NHLBI NIH HHS R01 HL141989NIH HHS 1R01HL141989NIMH NIH HHS R01 MH106522NINDS NIH HHS P30 NS050274
6 · The paper itself

Abstract

Clinically pertinent electrocardiogram (ECG) data from model systems, such as zebrafish, are crucial for illuminating factors contributing to human cardiac electrophysiological abnormalities and disease. Current zebrafish ECG collection strategies have not adequately addressed the consistent acquisition of high-quality traces or sources of phenotypic variation that could obscure data interpretation. Thus, we developed a novel platform to ensure high-quality recording of in vivo subdermal adult zebrafish ECGs and zebrafish ECG reading GUI (zERG), a program to acquire measurements from traces that commercial software cannot examine owing to erroneous peak calling. We evaluate normal ECG trait variation, revealing highly reproducible intervals and wave amplitude variation largely driven by recording artifacts, and identify sex and body size as potential confounders to PR, QRS and QT intervals. With this framework, we characterize the effect of the class I anti-arrhythmic drug flecainide acetate on adults, provide support for the impact of a Long QT syndrome model, and establish power calculations for this and other studies. These results highlight our pipeline as a robust approach to evaluate zebrafish models of human cardiac electrophysiological phenotypes.

Indexed as

Long QT SyndromeZebrafishAnimalsElectrocardiographyCardiac electrophysiologyFlecainide acetateRegression model developmentZebrafish adults

Identifiers

PMID34378773
PMCPMC8380046

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.