Evidence map›Paper›PMID 34374895›Full record

ArticleMolecular biology reports2021

Molecular detection of Shiga toxin-producing Escherichia coli (STEC) O157 in sheep, goats, cows and buffaloes.

Asim Shahzad, Fahim Ullah, Hamid Irshad, Shehzad Ahmed, Qismat Shakeela, Abrar Hussain Mian

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Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Prevalence and Antimicrobial Susceptibility ofVeterinary medicine international · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Investigating enterohemorrhagicOpen veterinary journal · 2025
    Article
  7. Article
  8. Article
  9. Molecular Detection of Shiga Toxin-ProducingInternational journal of microbiology · 2024
    Article
  10. The "Big Six": Hidden Emerging Foodborne Bacterial Pathogens.Tropical medicine and infectious disease · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Asim ShahzadDepartment of Microbiology, Hazara University, Garden Campus, Mansehra, 21300, Pakistan.
Fahim UllahDepartment of Microbiology, Hazara University, Garden Campus, Mansehra, 21300, Pakistan.
Hamid IrshadAnimal Health Program, Animal Sciences Institute, National Agricultural Research Centre (NARC), Park Road, Islamabad, 44000, Pakistan.
Shehzad AhmedDepartment of Microbiology, Hazara University, Garden Campus, Mansehra, 21300, Pakistan. s15_microbiologist@hu.edu.pk.
Qismat ShakeelaDepartment of Microbiology, Abbottabad University of Science & Technology, Havelian, 22010, Pakistan.
Abrar Hussain MianDepartment of Microbiology, Hazara University, Garden Campus, Mansehra, 21300, Pakistan. abrar.microbio@hu.edu.pk.ORCID http://orcid.org/0000-0002-7337-5415
Hazara University · PKAbbottabad University of Science and Technology · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundShiga toxin-producing E. coli (STEC) are important foodborne pathogens that causing serious public health consequences worldwide. The present study aimed to estimate the prevalence ratio and to identify the zoonotic potential of E. coli O157 isolates in slaughtered adult sheep, goats, cows and buffaloes. MATERIALS AND

methodsA total of 400 Recto-anal samples were collected from two targeted sites Rawalpindi and Islamabad. Among them, 200 samples were collected from the slaughterhouse of Rawalpindi included sheep (n = 75) and goats (n = 125). While, 200 samples were collected from the slaughterhouse of Islamabad included cows (n = 120) and buffalos (n = 80). All samples were initially processed in buffered peptone water and then amplified by conventional PCR. Samples positive for E. coli O157 were then streaked onto SMAC media plates. From each positive sample, six different Sorbitol fermented pink-colored colonies were isolated and analyzed again via conventional PCR to confirm the presence of rfbE O157 gene. Isolates positive for rfbE O157 gene were then further analyzed by multiplex PCR for the presence of STEC other virulent genes (sxt1, stx2, eae and ehlyA) simultaneously.

resultsOf 400 RAJ samples only 2 (0.5%) showed positive results for E. coli O157 gene, included sheep 1/75 (1.33%) and buffalo 1/80 (1.25%). However, goats (n = 125) and cows (n = 120) found negative for E. coli O157. Only 2 isolates from each positive sample of sheep (1/6) and buffalo (1/6) harbored rfbE O157 genes, while five isolates could not. The rfbE O157 isolate (01) of sheep sample did not carry any of STEC genes, while the rfbE O157 isolate (01) of buffalo sample carried sxt1, stx2, eae and ehlyA genes simultaneously.

conclusionIt was concluded that healthy adult sheep and buffalo are possibly essential carriers of STEC O157. However, rfbE O157 isolate of buffalo RAJ sample carried 4 STEC virulent genes, hence considered an important source of STEC infection to humans and environment which should need to devise proper control systems.

Indexed as

AnimalsBuffaloesCattleEscherichia coliEscherichia coli InfectionsEscherichia coli O157Escherichia coli ProteinsFecesGoatsMultiplex Polymerase Chain ReactionPakistanPrevalenceSheepShiga-Toxigenic Escherichia coliVirulenceVirulence FactorsEscherichia coli ProteinsVirulence FactorsConventional PCREscherichia coli (STEC) O157Multiplex PCRRAJ

Identifiers

PMID34374895
OpenAlexW3187672391

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.