Evidence map›Paper›PMID 34374763›Full record

ArticleJournal of insect science (Online)2021

New Insect Host Defense Peptides (HDP) From Dung Beetle (Coleoptera: Scarabaeidae) Transcriptomes.

Germán Alberto Téllez Ramirez, Juan Felipe Osorio-Méndez, Diana Carolina Henao Arias, Lily Johanna Toro S, Juliana Franco Castrillón, Maribel Rojas-Montoya, Jhon Carlos Castaño Osorio

Open access · goldAbstract read
In one paragraph

Article in Journal of insect science (Online), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Germán Alberto Téllez RamirezCenter of Biomedical Research, Group of Molecular Immunology, Universidad del Quindío, Carrera 15 and Calle 12 Norte, Armenia, Quindío, Colombia.ORCID 0000-0002-3057-9290
Juan Felipe Osorio-MéndezCenter of Biomedical Research, Group of Molecular Immunology, Universidad del Quindío, Carrera 15 and Calle 12 Norte, Armenia, Quindío, Colombia.ORCID 0000-0002-7326-8871
Diana Carolina Henao AriasCenter of Biomedical Research, Group of Molecular Immunology, Universidad del Quindío, Carrera 15 and Calle 12 Norte, Armenia, Quindío, Colombia.ORCID 0000-0001-8136-1059
Lily Johanna Toro SCenter of Biomedical Research, Group of Molecular Immunology, Universidad del Quindío, Carrera 15 and Calle 12 Norte, Armenia, Quindío, Colombia.ORCID 0000-0001-7906-1997
Juliana Franco CastrillónCenter of Biomedical Research, Group of Molecular Immunology, Universidad del Quindío, Carrera 15 and Calle 12 Norte, Armenia, Quindío, Colombia.ORCID 0000-0003-4942-5096
Maribel Rojas-MontoyaCenter of Biomedical Research, Group of Molecular Immunology, Universidad del Quindío, Carrera 15 and Calle 12 Norte, Armenia, Quindío, Colombia.ORCID 0000-0002-0966-7165
Jhon Carlos Castaño OsorioCenter of Biomedical Research, Group of Molecular Immunology, Universidad del Quindío, Carrera 15 and Calle 12 Norte, Armenia, Quindío, Colombia.ORCID 0000-0002-7639-3053
University of Quindío · CO

Funding

Colombia's Ministry of Science, Technology, and Innovation 111374455390MINCIENCIAS FP44842-250-2018
6 · The paper itself

Abstract

The Coleoptera Scarabaeidae family is one of the most diverse groups of insects on the planet, which live in complex microbiological environments. Their immune systems have evolved diverse families of Host Defense Peptides (HDP) with strong antimicrobial and immunomodulatory activities. However, there are several peptide sequences that await discovery in this group of organisms. This would pave the way to identify molecules with promising therapeutic potential. This work retrieved two sources of information: 1) De-novo transcriptomic data from two species of neotropical Scarabaeidae (Dichotomius satanas and Ontophagus curvicornis); 2) Sequence data deposited in available databases. A Blast-based search was conducted against the transcriptomes with a subset of sequences representative of the HDP. This work reports 155 novel HDP sequences identified in nine transcriptomes from seven species of Coleoptera: D. satanas (n = 76; 49.03%), O. curvicornis (n = 23; 14.83%), (Trypoxylus dichotomus) (n = 18; 11.61%), (Onthophagus nigriventris) (n = 10; 6.45%), (Heterochelus sp) (n = 6; 3.87%), (Oxysternon conspicillatum) (n = 18; 11.61%), and (Popillia japonica) (n = 4; 2.58%). These sequences were identified based on similarity to known HDP insect families. New members of defensins (n = 58; 37.42%), cecropins (n = 18; 11.61%), attancins (n = 41; 26.45%), and coleoptericins (n = 38; 24.52%) were described based on their physicochemical and structural characteristics, as well as their sequence relationship to other insect HDPs. Therefore, the Scarabaeidae family is a complex and rich group of insects with a great diversity of antimicrobial peptides with potential antimicrobial activity.

Indexed as

AnimalsAntimicrobial Cationic PeptidesColeopteraInsect ProteinsMicrobial Sensitivity TestsProtein ConformationTranscriptomeAntimicrobial Cationic Peptidesattacin antibacterial protein, insectcoleoptericin protein, insectInsect Proteinsantimicrobial cationic peptidececropincomputational biologydefensininsect protein

Identifiers

PMID34374763
PMCPMC8353981
OpenAlexW3191021836

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.