Evidence map›Paper›PMID 34373631›Full record

ReviewNature reviews. Microbiology2022

Interactions between bacterial and phage communities in natural environments.

Anne Chevallereau, Benoît J Pons, Stineke van Houte, Edze R Westra

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature reviews. Microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 357 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
357citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

357 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Principles for Rigorous Design and Application of Synthetic Microbial Communities.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Pooled it
  2. Article
  3. Characterization of defensome genes and mobile genetic Elements in different types of pasture soil agroecosystems from the Brazilian Amazon.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. A host-encoded prophage targets a Candidate Phyla Radiation bacterium and shapes episymbiotic interactions.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. mBio · 2026
    Article
  16. Article
  17. Phage as a prospective arsenal against superbugs.Molecular biology reports · 2026
    Review
  18. Article
  19. Article
  20. Article

297 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Anne ChevallereauEnvironment and Sustainability Institute, Biosciences, University of Exeter, Penryn, UK. anne.chevallereau@inserm.fr.ORCID 0000-0003-3369-7468
Benoît J PonsEnvironment and Sustainability Institute, Biosciences, University of Exeter, Penryn, UK.ORCID 0000-0002-9137-1047
Stineke van HouteEnvironment and Sustainability Institute, Biosciences, University of Exeter, Penryn, UK.
Edze R WestraEnvironment and Sustainability Institute, Biosciences, University of Exeter, Penryn, UK. e.r.westra@exeter.ac.uk.ORCID 0000-0003-4396-0354

Funding

Biotechnology and Biological Sciences Research Council BB/R010781/10Biotechnology and Biological Sciences Research Council BB/S017674/1
6 · The paper itself

Abstract

We commonly acknowledge that bacterial viruses (phages) shape the composition and evolution of bacterial communities in nature and therefore have important roles in ecosystem functioning. This view stems from studies in the 1990s to the first decade of the twenty-first century that revealed high viral abundance, high viral diversity and virus-induced microbial death in aquatic ecosystems as well as an association between collapses in bacterial density and peaks in phage abundance. The recent surge in metagenomic analyses has provided deeper insight into the abundance, genomic diversity and spatio-temporal dynamics of phages in a wide variety of ecosystems, ranging from deep oceans to soil and the mammalian digestive tract. However, the causes and consequences of variations in phage community compositions remain poorly understood. In this Review, we explore current knowledge of the composition and evolution of phage communities, as well as their roles in controlling the population and evolutionary dynamics of bacterial communities. We discuss the need for greater ecological realism in laboratory studies to capture the complexity of microbial communities that thrive in natural environments.

Indexed as

Host Microbial InteractionsMetagenomeMicrobiotaBacteriaBacteriophagesGastrointestinal TractHumansMetagenomicsOceans and SeasSoilSoil

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.