Evidence map›Paper›PMID 34373560›Full record

ArticleScientific reports2021

Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes.

M A Kolmann, M Kalacska, O Lucanus, L Sousa, D Wainwright, J P Arroyo-Mora, M C Andrade

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

M A KolmannUniversity of Michigan, Museum of Paleontology, 1105 N University Ave, Ann Arbor, MI, 48109, USA. mkolmann@gmail.com.
M KalacskaApplied Remote Sensing Lab, McGill University, Montreal, QC, H3A 0B9, Canada.
O LucanusBelow Water Inc., Vaudreuil-Dorion, QC, J7V 0K4, Canada.
L SousaLaboratório de Ictiologia de Altamira, Universidade Federal do Pará, Altamira, PA, Brazil.
D WainwrightYale University (Peabody Museum), New Haven, CT, USA.
J P Arroyo-MoraNational Research Council Canada, Ottawa, ON, Canada.
M C AndradeNúcleo de Ecologia Aquática e Pesca da Amazônia, Universidade Federal do Pará, Belém, PA, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hyperspectral data encode information from electromagnetic radiation (i.e., color) of any object in the form of a spectral signature; these data can then be used to distinguish among materials or even map whole landscapes. Although hyperspectral data have been mostly used to study landscape ecology, floral diversity and many other applications in the natural sciences, we propose that spectral signatures can be used for rapid assessment of faunal biodiversity, akin to DNA barcoding and metabarcoding. We demonstrate that spectral signatures of individual, live fish specimens can accurately capture species and clade-level differences in fish coloration, specifically among piranhas and pacus (Family Serrasalmidae), fishes with a long history of taxonomic confusion. We analyzed 47 serrasalmid species and could distinguish spectra among different species and clades, with the method sensitive enough to document changes in fish coloration over ontogeny. Herbivorous pacu spectra were more like one another than they were to piranhas; however, our method also documented interspecific variation in pacus that corresponds to cryptic lineages. While spectra do not serve as an alternative to the collection of curated specimens, hyperspectral data of fishes in the field should help clarify which specimens might be unique or undescribed, complementing existing molecular and morphological techniques.

Indexed as

BiodiversityAnimalsCharaciformesDNA Barcoding, TaxonomicHyperspectral ImagingPhenotypePigmentationSouth America

Identifiers

PMID34373560
PMCPMC8352966

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.