Evidence map›Paper›PMID 34373496›Full record

ArticleScientific reports2021

Identification of intima-to-media signals for flow-induced vascular remodeling using correlative gene expression analysis.

John Kolega, Kerry E Poppenberg, Hee-Woong Lim, Liza C Gutierrez, Sricharan S Veeturi, Adnan H Siddiqui, Hamidreza Rajabzadeh-Oghaz, Vincent M Tutino

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. A One-Dimensional (1D) Computational Fluid Dynamics Study of Fontan-Associated Liver Disease (FALD).International journal for numerical methods in biomedical engineering · 2026
    Article
  2. Vascular Cast to Program Antistenotic Hemodynamics and Remodeling of Vein Graft.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

John KolegaCanon Stroke and Vascular Research Center, University at Buffalo, Buffalo, NY, USA. kolega@buffalo.edu.
Kerry E PoppenbergCanon Stroke and Vascular Research Center, University at Buffalo, Buffalo, NY, USA.
Hee-Woong LimDivision of Biomedical Informatics, Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Liza C GutierrezCanon Stroke and Vascular Research Center, University at Buffalo, Buffalo, NY, USA.
Sricharan S VeeturiCanon Stroke and Vascular Research Center, University at Buffalo, Buffalo, NY, USA.
Adnan H SiddiquiCanon Stroke and Vascular Research Center, University at Buffalo, Buffalo, NY, USA.
Hamidreza Rajabzadeh-OghazCanon Stroke and Vascular Research Center, University at Buffalo, Buffalo, NY, USA.
Vincent M TutinoCanon Stroke and Vascular Research Center, University at Buffalo, Buffalo, NY, USA.
University at Buffalo, State University of New York · USUniversity of Cincinnati · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changes in blood flow can induce arterial remodeling. Intimal cells sense flow and send signals to the media to initiate remodeling. However, the nature of such intima-media signaling is not fully understood. To identify potential signals, New Zealand white rabbits underwent bilateral carotid ligation to increase flow in the basilar artery or sham surgery (n = 2 ligated, n = 2 sham). Flow was measured by transcranial Doppler ultrasonography, vessel geometry was determined by 3D angiography, and hemodynamics were quantified by computational fluid dynamics. 24 h post-surgery, the basilar artery and terminus were embedded for sectioning. Intima and media were separately microdissected from the sections, and whole transcriptomes were obtained by RNA-seq. Correlation analysis of expression across all possible intima-media gene pairs revealed potential remodeling signals. Carotid ligation increased flow in the basilar artery and terminus and caused differential expression of 194 intimal genes and 529 medial genes. 29,777 intima-media gene pairs exhibited correlated expression. 18 intimal genes had > 200 medial correlates and coded for extracellular products. Gene ontology of the medial correlates showed enrichment of organonitrogen metabolism, leukocyte activation/immune response, and secretion/exocytosis processes. This demonstrates correlative expression analysis of intimal and medial genes can reveal novel signals that may regulate flow-induced arterial remodeling.

Indexed as

AnimalsBasilar ArteryFemaleGene Expression ProfilingGene OntologyHemodynamicsModels, AnimalModels, CardiovascularRabbitsSignal TransductionTunica IntimaTunica MediaVascular Remodeling

Identifiers

PMID34373496
PMCPMC8352890
OpenAlexW3189680543

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.