Evidence map›Paper›PMID 34373451›Full record

ArticleNature communications2021

Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer.

Athea Vichas, Amanda K Riley, Naomi T Nkinsi, Shriya Kamlapurkar, Phoebe C R Parrish, April Lo, Fujiko Duke, Jennifer Chen, Iris Fung, Jacqueline Watson and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
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  9. Microtubule regulation in cancer cells.Frontiers in cell and developmental biology · 2025
    Article
  10. Unlocking TRPM7 interactions: A database-driven quest.Computational and structural biotechnology journal · 2025
    Review
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Athea Vichas *Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Amanda K Riley *Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-5720-3269
Naomi T NkinsiHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Shriya KamlapurkarHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Phoebe C R ParrishHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-3530-0105
April LoHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Fujiko DukeBroad Institute of MIT & Harvard, Cambridge, MA, USA.
Jennifer ChenBroad Institute of MIT & Harvard, Cambridge, MA, USA.
Iris FungBroad Institute of MIT & Harvard, Cambridge, MA, USA.
Jacqueline WatsonBroad Institute of MIT & Harvard, Cambridge, MA, USA.
Matthew ReesBroad Institute of MIT & Harvard, Cambridge, MA, USA.ORCID 0000-0002-2987-7581
Austin M GabelDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.ORCID 0000-0002-1418-0327
James D ThomasComputational Biology Program, Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-8893-6350
Robert K BradleyDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.ORCID 0000-0002-8046-1063
John K LeeHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Emily M HatchHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-3393-4075
Marina K BaineDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, USA.
Natasha RekhtmanDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, USA.
Marc LadanyiDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, USA.
Federica PiccioniBroad Institute of MIT & Harvard, Cambridge, MA, USA.
Alice H BergerHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA. ahberger@fredhutch.org.ORCID 0000-0002-6538-2658
Broad Institute · USFred Hutch Cancer Center · USUniversity of Washington · USMemorial Sloan Kettering Cancer Center · USCape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa · ZA

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
Understanding and exploiting novel therapeutic vulnerabilities of RIT1-driven lung cancerR37CA252050 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Alice Berger · 2021 to 2026
$3.1M
Mechanisms regulating nuclear envelope structure and stabilityR35GM124766 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HATCH, EMILY M · 2017 to 2021
$2.2M
Investigating the role of the small GTPase RIT1 in lung adenocarcinomaR00CA197762 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BERGER, ALICE · 2017 to 2019
$747k
NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA015704NCI NIH HHS R00 CA197762NCI NIH HHS R37 CA252050NIGMS NIH HHS R35 GM124766NIGMS NIH HHS T32 GM007266NIGMS NIH HHS T32 GM007270
6 · The paper itself

Abstract

CRISPR-based cancer dependency maps are accelerating advances in cancer precision medicine, but adequate functional maps are limited to the most common oncogenes. To identify opportunities for therapeutic intervention in other rarer subsets of cancer, we investigate the oncogene-specific dependencies conferred by the lung cancer oncogene, RIT1. Here, genome-wide CRISPR screening in KRAS, EGFR, and RIT1-mutant isogenic lung cancer cells identifies shared and unique vulnerabilities of each oncogene. Combining this genetic data with small-molecule sensitivity profiling, we identify a unique vulnerability of RIT1-mutant cells to loss of spindle assembly checkpoint regulators. Oncogenic RIT1

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCell CycleCell Line, TumorErbB ReceptorsFemaleGene Knockout TechniquesHigh-Throughput Screening AssaysHumansLung NeoplasmsMaleMiceMolecular Targeted TherapyMutationNIH 3T3 CellsOncogenesAdaptor Proteins, Signal TransducingEGFR protein, humanErbB ReceptorsKRAS protein, humanProto-Oncogene Proteins p21(ras)ras ProteinsRIT1 protein, humanTranscription FactorsYAP1 protein, humanYAP-Signaling Proteins

Identifiers

PMID34373451
PMCPMC8352964
OpenAlexW3189889831

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.