Evidence map›Paper›PMID 34372586›Full record

ArticleViruses2021

Detection and Genetic Characterization of Hepatitis B and D Viruses: A Multi-Site Cross-Sectional Study of People Who Use Illicit Drugs in the Amazon Region.

Ronylson José S Silva, Raquel Silva do Nascimento, José Augusto J Oliveira-Neto, Fabricio Quaresma Silva, Juliana Nádia F Piauiense, Camila Moraes Gomes, Luiz Marcelo L Pinheiro, Rafael Lima Resque, João Renato R Pinho, Emil Kupek and 5 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Ronylson José S SilvaPrograma de Pós-Graduação em Biologia Ambiental, Universidade Federal do Pará, Bragança 68600-000, PA, Brazil.
Raquel Silva do NascimentoPrograma de Pós-Graduação em Biologia Ambiental, Universidade Federal do Pará, Bragança 68600-000, PA, Brazil.
José Augusto J Oliveira-NetoInstituto de Estudos Costeiros, Universidade Federal do Pará, Bragança 68600-000, PA, Brazil.
Fabricio Quaresma SilvaInstituto de Estudos Costeiros, Universidade Federal do Pará, Bragança 68600-000, PA, Brazil.
Juliana Nádia F PiauiensePrograma de Pós-Graduação em Saúde na Amazônia, Universidade Federal do Pará, Belém 66055-240, PA, Brazil.
Camila Moraes GomesPrograma de Pós-Graduação em Biologia Ambiental, Universidade Federal do Pará, Bragança 68600-000, PA, Brazil.
Luiz Marcelo L PinheiroFaculdade de Ciências Biológicas, Campus do Marajó, Universidade Federal do Pará, Soure 68870-000, PA, Brazil.
Rafael Lima ResqueDepartamento de Ciências Biológicas e da Saúde, Universidade Federal do Amapá, Macapá 68903-419, AP, Brazil.
João Renato R PinhoInstituto de Medicina Tropical, Universidade de São Paulo, São Paulo 05403-000, SP, Brazil.ORCID 0000-0003-3999-0489
Emil KupekDepartamento de Saúde Pública, Universidade Federal de Santa Catarina, Florianópolis 88040-900, SC, Brazil.
Benedikt FischerCentre for Applied Research in Mental Health and Addiction, Faculty of Health Sciences, Simon Fraser University, Vancouver, BC V6B 5K3, Canada.ORCID 0000-0002-2186-4030
Luiz Fernando A MachadoInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil.ORCID 0000-0002-4571-4715
Luísa Caricio MartinsPrograma de Pós-Graduação em Saúde na Amazônia, Universidade Federal do Pará, Belém 66055-240, PA, Brazil.
José Alexandre R LemosInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil.
Aldemir B Oliveira-FilhoPrograma de Pós-Graduação em Biologia Ambiental, Universidade Federal do Pará, Bragança 68600-000, PA, Brazil.ORCID 0000-0002-4888-3530
Universidade Federal do Pará · BRUniversidade de São Paulo · BRUniversidade Federal de Santa Catarina · BRUniversidade Federal do Amapá · BRUniversity of Auckland · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B (HBV) and delta (HDV) viruses are endemic in the Amazon region, but vaccine coverage against HBV is still limited. People who use illicit drugs (PWUDs) represent a high-risk group due to common risk behavior and socioeconomic factors that facilitate the acquisition and transmission of pathogens. The present study assessed the presence of HBV and HBV-HDV co-infection, identified viral sub-genotypes, and verified the occurrence of mutations in coding regions for HBsAg and part of the polymerase in HBV-infected PWUDs in municipalities of the Brazilian states of Amapá and Pará, in the Amazon region. In total, 1074 PWUDs provided blood samples and personal data in 30 municipalities of the Brazilian Amazon. HBV and HDV were detected by enzyme-linked immunosorbent assay and polymerase chain reaction. Viral genotypes were identified by nucleotide sequencing followed by phylogenetic analysis, whereas viral mutations were analyzed by specialized software. High rates of serological (32.2%) and molecular (7.2%) markers for HBV were detected, including cases of occult HBV infection (2.5%). Sub-genotypes A1, A2, D4, and F2a were most frequently found. Escape mutations due to vaccine and antiviral resistance were identified. Among PWUDs with HBV DNA, serological (19.5%) and molecular (11.7%) HDV markers were detected, such as HDV genotypes 1 and 3. These are worrying findings, presenting clear implications for urgent prevention and treatment needs for the carriers of these viruses.

Indexed as

AdultBrazilCoinfectionCross-Sectional StudiesDNA, ViralDrug UsersEnzyme-Linked Immunosorbent AssayFemaleGenotypeHepatitis BHepatitis B Surface AntigensHepatitis B virusHepatitis DHepatitis Delta VirusHumansIllicit DrugsDNA, ViralHepatitis B Surface AntigensIllicit DrugsRNA, ViralAmazonepidemiologyexposuregenotypesHBVHDVinterventionsmutations

Identifiers

PMID34372586
PMCPMC8310228
OpenAlexW3180032874

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.