Evidence map›Paper›PMID 34372510›Full record

ArticleViruses2021

Defense-Related Gene Expression Following an Orthotospovirus Infection Is Influenced by Host Resistance in

Michael A Catto, Anita Shrestha, Mark R Abney, Donald E Champagne, Albert K Culbreath, Soraya C M Leal-Bertioli, Brendan G Hunt, Rajagopalbabu Srinivasan

Abstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Michael A CattoDepartment of Entomology, University of Georgia, Athens, GA 30606, USA.ORCID 0000-0002-9257-0320
Anita ShresthaDepartment of Entomology, University of Georgia, Tifton, GA 31793, USA.
Mark R AbneyDepartment of Entomology, University of Georgia, Tifton, GA 31793, USA.
Donald E ChampagneDepartment of Entomology, University of Georgia, Athens, GA 30606, USA.
Albert K CulbreathDepartment of Plant Pathology, University of Georgia, Tifton, GA 31793, USA.
Soraya C M Leal-BertioliDepartment of Plant Pathology, University of Georgia, Athens, GA 30602, USA.
Brendan G HuntDepartment of Entomology, University of Georgia, Griffin, GA 30223, USA.
Rajagopalbabu SrinivasanDepartment of Entomology, University of Georgia, Griffin, GA 30223, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Planting resistant cultivars is the most effective tactic to manage the thrips-transmitted tomato spotted wilt orthotospovirus (TSWV) in peanut plants. However, molecular mechanisms conferring resistance to TSWV in resistant cultivars are unknown. In this study, transcriptomes of TSWV-susceptible (SunOleic 97R) and field-resistant (Tifguard) peanut cultivars with and without TSWV infection were assembled and differentially expressed genes (DEGs) were compared. There were 4605 and 2579 significant DEGs in SunOleic 97R and Tifguard, respectively. Despite the lower number of DEGs in Tifguard, an increased proportion of defense-related genes were upregulated in Tifguard than in the susceptible cultivar. Examples included disease resistance (R) proteins, leucine-rich repeats, stilbene synthase, dicer, and calmodulin. Pathway analysis revealed the increased downregulation of genes associated with defense and photosynthesis in the susceptible cultivar rather than in the resistant cultivar. These results suggest that essential physiological functions were less perturbed in the resistant cultivar than in the susceptible cultivar and that the defense response following TSWV infection was more robust in the resistant cultivar than in the susceptible cultivar.

Indexed as

Gene ExpressionArachisDisease ResistanceGene Expression ProfilingPlant DiseasesSolanum lycopersicumTospovirusdifferential gene expressionfield-resistant peanut cultivarsSunoleic 97RTifguardtomato spotted wilt orthotospovirus

Identifiers

PMID34372510
PMCPMC8310252

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.