Evidence map›Paper›PMID 34371025›Full record

ArticleJournal of neuroscience methods2021

Automated analyses for single-fiber electrophysiological recordings using a newly developed Microsoft Excel application and graphical user interface.

Max Grayson, Daniel Nagle-Pinkham, Dmitry Gokhman, Shivani Ruparel

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Max GraysonDepartment of Endodontics, University of Texas Health San Antonio, TX, USA.
Daniel Nagle-PinkhamDepartment of Mathematics, University of Texas at San Antonio, TX, USA.
Dmitry GokhmanDepartment of Mathematics, University of Texas at San Antonio, TX, USA.
Shivani RuparelDepartment of Endodontics, University of Texas Health San Antonio, TX, USA. Electronic address: ruparels@uthscsa.edu.

Funding

LIGHT and Lymphotoxin targeting for the treatment of chronic orofacial pain conditionsR01DE029187 · NIDCR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI AKOPIAN, ARMEN N, RUPAREL, SHIVANI B · 2019 to 2021
$3.8M
The Role of Peripheral Brain-Derived Neurotrophic Factor (BDNF) Signaling in Oral Cancer PainR01DE027223 · NIDCR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI RUPAREL, SHIVANI B · 2017 to 2021
$1.8M
NIDCR NIH HHS R01 DE027223NIDCR NIH HHS R01 DE029187
6 · The paper itself

Abstract

backgroundElectrophysiological recordings of isolated sensory afferents are commonly used in the field of pain research to investigate peripheral mechanisms of nociception in various pain models. The method involves skillful and tedious recordings of teased fibers from nerve preparations as well as time-consuming post-recording analyses. To increase efficiency and productivity of data analyses of recorded action potentials, we developed and validated a novel, easy-to-use Microsoft Excel-based application using Visual Basic Programming. NEW

methodA code for the novel program, shigraspike1.0, was written to create a module to include customizable subroutines for analyses for electrical and mechanical responses. Using previously recorded action potentials with tongue-lingual nerve preparations, the program was validated for appropriate execution, ease-of-use, accuracy of the output data and time taken for analyses.

resultsWe observed appropriate execution of shigraspike1.0 on Windows and iOS desktop platforms that included computation of response latency of the spike of interest using electrical stimulus as well as estimation of the number of impulses at each force with a step-and-hold mechanical ramp of 10-200mN. Output data obtained by shigrapsike1.0 for both stimulus types were accurate and statistically insignificant from manual analyses. COMPARISON WITH EXISTING

methodThe novel application shigraspike1.0, allows for rapid analyses for single-fiber recordings and takes less than half the time to analyze electrical and mechanical responses compared to manual analyses.

conclusionsThe newly developed shigraspike1.0 application can be a very productive tool to be routinely used for efficient analyses of single-fiber electrophysiology in pain research.

Indexed as

Action PotentialsReaction TimeAnalysisAutomationShigraSpikeSingle-fiber recordings

Identifiers

PMID34371025
PMCPMC8403649

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.