Evidence map›Paper›PMID 34367729›Full record

ArticleOncoimmunology2021

Distinct microbial communities colonize tonsillar squamous cell carcinoma.

Angelina De Martin, Mechthild Lütge, Yves Stanossek, Céline Engetschwiler, Jovana Cupovic, Kirsty Brown, Izadora Demmer, Martina A Broglie, Markus B Geuking, Wolfram Jochum and 3 more

Open access · goldAbstract read
In one paragraph

Article in Oncoimmunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Pathogens (Basel, Switzerland) · 2023
    Article
  11. PI16Nature immunology · 2023
    Article
  12. Article
  13. Article
  14. Journal of oral microbiology · 2022
    Review
  15. Article
  16. Article
  17. Frontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Angelina De MartinInstitute of Immunobiology, Kantonsspital St.Gallen, St. Gallen, Switzerland.ORCID 0000-0002-9056-8075
Mechthild LütgeInstitute of Immunobiology, Kantonsspital St.Gallen, St. Gallen, Switzerland.ORCID 0000-0001-9011-5319
Yves StanossekInstitute of Immunobiology, Kantonsspital St.Gallen, St. Gallen, Switzerland.
Céline EngetschwilerInstitute of Immunobiology, Kantonsspital St.Gallen, St. Gallen, Switzerland.
Jovana CupovicInstitute of Immunobiology, Kantonsspital St.Gallen, St. Gallen, Switzerland.
Kirsty BrownDepartment of Physiology and Pharmacology, Snyder Institute for Chronic Diseases, Cumming School of Medicine, University of Calgary, Calgary, Canada.
Izadora DemmerInstitute of Pathology, Kantonsspital Sankt Gallen, St. Gallen, Switzerland.
Martina A BroglieDepartment of Otorhinolaryngology - Head and Neck Surgery, University Hospital Zurich, University of Zurich, Zurich, Switzerland.
Markus B GeukingDepartment of Microbiology, Immunology and Infectious Diseases, Snyder Institute of Chronic Diseases; Cumming School of Medicine, University of Calgary, Calgary, Canada.
Wolfram JochumInstitute of Pathology, Kantonsspital Sankt Gallen, St. Gallen, Switzerland.
Kathy D McCoyDepartment of Physiology and Pharmacology, Snyder Institute for Chronic Diseases, Cumming School of Medicine, University of Calgary, Calgary, Canada.ORCID 0000-0002-3900-9227
Sandro J StoeckliDepartment of Otorhinolaryngology, Head and Neck Surgery, Kantonsspital St.Gallen, St. Gallen, Switzerland.
Burkhard LudewigInstitute of Immunobiology, Kantonsspital St.Gallen, St. Gallen, Switzerland.ORCID 0000-0002-7685-573X
Kantonsspital St. Gallen · CHUniversity of Calgary · CAUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Squamous cell carcinoma of the tonsil is one of the most frequent cancers of the oropharynx. The escalating rate of tonsil cancer during the last decades is associated with the increase of high risk-human papilloma virus (HR-HPV) infections. While the microbiome in oropharyngeal malignant diseases has been characterized to some extent, the microbial colonization of HR-HPV-associated tonsil cancer remains largely unknown. Using 16S rRNA gene amplicon sequencing, we have characterized the microbiome of human palatine tonsil crypts in patients suffering from HR-HPV-associated tonsil cancer in comparison to a control cohort of adult sleep apnea patients. We found an increased abundance of the phyla

Indexed as

Carcinoma, Squamous CellMicrobiotaTonsillar NeoplasmsEubacterialesHumansPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16S16S rRNA gene amplicon sequencinghigh risk-human papilloma virus (hr-hpv)microbiometonsil cancertonsillar microbiomeTonsillar squamous cell carcinoma

Identifiers

PMID34367729
PMCPMC8312615
OpenAlexW3135795993

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.